RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 PRSS57Q6UWY2 283 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 LHX4Q969G2 390 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 NABP2Q9BQ15 211 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 REG4Q9BYZ8 158 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 SLC35D1Q9NTN3 355 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 ODF3BA8MYP8 253 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 HTR1DP28221 377 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 RPEQ96AT9 228 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 ARPC5LQ9BPX5 153 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 UBQLN2Q9UHD9 624 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.7■□□□□ 0.268e-8■■■■■ 40.2
KPNA1-210ENST00000494339 CR1P17927 2039 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 MARCH11A6NNE9 402 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 H0YJW9 148 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 H7C2Y5 167 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 IGKV1-16P04430 117 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 EXOSC2Q13868 293 aaKnown RBP16.69■□□□□ 0.26
KPNA1-210ENST00000494339 RTL8BQ17RB0 113 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 Q6ZRM9 215 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 LHFPL4Q7Z7J7 247 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 VKORC1L1Q8N0U8 176 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 OR5AN1Q8NGI8 311 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 R3HDM4Q96D70 268 aa16.69■□□□□ 0.26
KPNA1-210ENST00000494339 LY6LH3BQJ8 138 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 PITX3O75364 302 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 APOA2P02652 100 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 UBA52P62987 128 aaKnown RBP16.68■□□□□ 0.26
KPNA1-210ENST00000494339 ID3Q02535 119 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 LOXL1Q08397 574 aaPredicted RBP16.68■□□□□ 0.26
KPNA1-210ENST00000494339 SSX9Q7RTT3 188 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 CACNG5Q9UF02 275 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 SVEP1Q4LDE5 3571 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 IGHV3-72A0A0B4J1Y9 119 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 NXPH3O95157 252 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 CFDP00746 253 aaPredicted RBP16.68■□□□□ 0.26
KPNA1-210ENST00000494339 PVALBP20472 110 aaPredicted RBP16.68■□□□□ 0.26
KPNA1-210ENST00000494339 RPL12P30050 165 aaKnown RBP16.68■□□□□ 0.26
KPNA1-210ENST00000494339 HIF1ANQ9NWT6 349 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 DPM3Q9P2X0 92 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 HILPDAQ9Y5L2 63 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 MMP24Q9Y5R2 645 aa16.68■□□□□ 0.26
KPNA1-210ENST00000494339 CCDC168Q8NDH2 2452 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 LEUTXA8MZ59 168 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 KCNAB3O43448 404 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 GAPDHP04406 335 aaKnown RBP16.67■□□□□ 0.26
KPNA1-210ENST00000494339 HKR1P10072 659 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 P2RY1P47900 373 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 H2BFWTQ7Z2G1 175 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 DMBX1Q8NFW5 382 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 COA4Q9NYJ1 87 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 RCL1Q9Y2P8 373 aaKnown RBP16.67■□□□□ 0.26
KPNA1-210ENST00000494339 NOTCH2Q04721 2471 aa16.67■□□□□ 0.26
KPNA1-210ENST00000494339 IGHV1-3A0A0C4DH29 117 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 MSGN1A6NI15 193 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 PAX6P26367 422 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 TPTE2P1Q5T6R2 138 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 GPR157Q5UAW9 335 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 MOB3BQ86TA1 216 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 LINC01356Q8N9X3 169 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 C1orf159Q96HA4 380 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 TAAR5O14804 337 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 NQO2P16083 231 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 HTR2BP41595 481 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 UBE2E1P51965 193 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 LGALS4P56470 323 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 ERVK-16P61578 105 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 CXorf66Q5JRM2 361 aaPredicted RBP16.66■□□□□ 0.26
KPNA1-210ENST00000494339 WFDC11Q8NEX6 87 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 ZNF471Q9BX82 626 aaPredicted RBP16.66■□□□□ 0.26
KPNA1-210ENST00000494339 ZC4H2Q9NQZ6 224 aa16.66■□□□□ 0.26
KPNA1-210ENST00000494339 ATP6V1G1O75348 118 aa16.65■□□□□ 0.26
KPNA1-210ENST00000494339 P0C879 139 aa16.65■□□□□ 0.26
KPNA1-210ENST00000494339 CEACAM3P40198 252 aa16.65■□□□□ 0.26
KPNA1-210ENST00000494339 TAGLNQ01995 201 aaKnown RBP16.65■□□□□ 0.26
KPNA1-210ENST00000494339 DHRS7BQ6IAN0 325 aaPredicted RBP16.65■□□□□ 0.26
KPNA1-210ENST00000494339 ST8SIA2Q92186 375 aa16.65■□□□□ 0.26
KPNA1-210ENST00000494339 C7orf69Q9H7B7 122 aa16.65■□□□□ 0.26
KPNA1-210ENST00000494339 WASHC3Q9Y3C0 194 aa16.65■□□□□ 0.26
KPNA1-210ENST00000494339 AUP1Q9Y679 476 aa16.65■□□□□ 0.26
KPNA1-210ENST00000494339 TRAV20A0A0B4J274 112 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 TXNL1O43396 289 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 SPDEFO95238 335 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 RRASP10301 218 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 SSX2Q16385 188 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 PDPNQ86YL7 162 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 OR8H3Q8N146 312 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 C17orf50Q8WW18 174 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 RHOVQ96L33 236 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 C11orf1Q9H5F2 150 aa16.64■□□□□ 0.26
KPNA1-210ENST00000494339 A0A1W2PPI3 338 aa16.64■□□□□ 0.25
KPNA1-210ENST00000494339 WRBO00258 174 aa16.64■□□□□ 0.25
KPNA1-210ENST00000494339 SHOXO15266 292 aa16.64■□□□□ 0.25
KPNA1-210ENST00000494339 GPR137BO60478 399 aa16.64■□□□□ 0.25
KPNA1-210ENST00000494339 POLR2GP62487 172 aaKnown RBP eCLIP16.64■□□□□ 0.25
KPNA1-210ENST00000494339 STOML3Q8TAV4 291 aa16.64■□□□□ 0.25
KPNA1-210ENST00000494339 SCARB1Q8WTV0 552 aa16.64■□□□□ 0.25
KPNA1-210ENST00000494339 FLYWCH2Q96CP2 140 aaKnown RBP16.64■□□□□ 0.25
KPNA1-210ENST00000494339 PHYHIPLQ96FC7 376 aa16.64■□□□□ 0.25
KPNA1-210ENST00000494339 IGHV3OR16-10A0A075B7F0 116 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 CENPVL3A0A0U1RRI6 287 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms