RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 VKORC1L1Q8N0U8 176 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 LINC00311Q8N616 119 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 COMMD1Q8N668 190 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 C8orf31Q8N9H6 132 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 ITLN2Q8WWU7 325 aaPredicted RBP8.71□□□□□ -1.02
CLCN6-208ENST00000494028 PSMG3Q9BT73 122 aaPredicted RBP8.71□□□□□ -1.02
CLCN6-208ENST00000494028 RSG1Q9BU20 258 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 TMEM147Q9BVK8 224 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 SCRT1Q9BWW7 348 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 WDR61Q9GZS3 305 aaKnown RBP8.71□□□□□ -1.02
CLCN6-208ENST00000494028 TREM1Q9NP99 234 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 SLC35D1Q9NTN3 355 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 CBLN4Q9NTU7 201 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 COL6A6A6NMZ7 2263 aa8.71□□□□□ -1.02
CLCN6-208ENST00000494028 DOCK11Q5JSL3 2073 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 A0A087X0M5 115 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 A0A1B0GX30 115 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 TSPAN15O95858 294 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 APOC3P02656 99 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 CD5P06127 495 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 OR8U8P0C7N1 319 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 CT45A6P0DMU7 189 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 CT45A5P0DMU8 189 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 CT45A7P0DMV0 189 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 GNLYP22749 145 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 SNCAP37840 140 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 VDAC2P45880 294 aaPredicted RBP8.7□□□□□ -1.02
CLCN6-208ENST00000494028 ZNF137PP52743 207 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 VWC2Q2TAL6 325 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 LRRC75BQ2VPJ9 315 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 DHRS7BQ6IAN0 325 aaPredicted RBP8.7□□□□□ -1.02
CLCN6-208ENST00000494028 OR8G2PQ6IF36 304 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 OR4A47Q6IF82 309 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 SLC25A24Q6NUK1 477 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 SPSB3Q6PJ21 355 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 ATRAIDQ6UW56 229 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 DPPA3Q6W0C5 159 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 DTX2Q86UW9 622 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 LFNGQ8NES3 379 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 OR52E5Q8NH55 327 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 TCF19Q9Y242 345 aa8.7□□□□□ -1.02
CLCN6-208ENST00000494028 FOXA2Q9Y261 457 aaPredicted RBP8.7□□□□□ -1.02
CLCN6-208ENST00000494028 A0A1W2PPR1 153 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 C9JQL5 133 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 H0YJW9 148 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 RBMXL2O75526 392 aaKnown RBP8.69□□□□□ -1.02
CLCN6-208ENST00000494028 SCAF4O95104 1147 aaKnown RBP8.69□□□□□ -1.02
CLCN6-208ENST00000494028 SOD3P08294 240 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 COL8A2P25067 703 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 SPCS3P61009 180 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 GUCA2BQ16661 112 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 RTL8BQ17RB0 113 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 AKR1C8PQ5T2L2 129 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 AVPI1Q5T686 147 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 SP5Q6BEB4 398 aaPredicted RBP8.69□□□□□ -1.02
CLCN6-208ENST00000494028 ZNF841Q6ZN19 808 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 ZNF429Q86V71 674 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 THNSL2Q86YJ6 484 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 OR4A16Q8NH70 328 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 RAB39BQ96DA2 213 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 UQCC1Q9NVA1 299 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 RALYQ9UKM9 306 aaKnown RBP8.69□□□□□ -1.02
CLCN6-208ENST00000494028 FBXO7Q9Y3I1 522 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 TIMM9Q9Y5J7 89 aa8.69□□□□□ -1.02
CLCN6-208ENST00000494028 PRSS46E5RG02 174 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 RNASEK-C17orf49H0YIS7 233 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 LY86O95711 162 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 IFNA17P01571 189 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 APOA2P02652 100 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 PRB1P04280 392 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 IL6RP08887 468 aaPredicted RBP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 SFTA3P0C7M3 94 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 SAA1P0DJI8 122 aaPredicted RBP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 IGHV1-8P0DP01 117 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 HOXA1P49639 335 aaPredicted RBP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 DVL1P1P54792 670 aaPredicted RBP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 RPS16P62249 146 aaKnown RBP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 ATP6V1FQ16864 119 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 PUSL1Q8N0Z8 303 aaKnown RBP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 C11orf42Q8N5U0 333 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 OR13D1Q8NGV5 346 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 C8orf46Q8TAG6 207 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 SUN5Q8TC36 379 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 SCGB1C1Q8TD33 95 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 TAF15Q92804 592 aaKnown RBP eCLIP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 ST6GALNAC6Q969X2 333 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 PINX1Q96BK5 328 aaKnown RBP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 RBMXL1Q96E39 390 aaKnown RBP8.68□□□□□ -1.02
CLCN6-208ENST00000494028 RHOVQ96L33 236 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 NABP2Q9BQ15 211 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 SEC11CQ9BY50 192 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 HIPK2Q9H2X6 1198 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 TMEM14BQ9NUH8 114 aa8.68□□□□□ -1.02
CLCN6-208ENST00000494028 A0A1B0GV50 99 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 A0A1B0GW64 132 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 NBASA2RRP1 2371 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 F8W036 122 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 C19orf84I3L1E1 186 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 J3QR06 171 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 GPR37O15354 613 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms