RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ZDBF2Q9HCK1 2354 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 COL4A6Q14031 1691 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 MYO9BQ13459 2157 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 IGHV3-21A0A0B4J1V1 117 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 LEUTXA8MZ59 168 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 B4DEV8 164 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 IGLL5B9A064 214 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 K7ERS5 55 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 IL4P05112 153 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 OR12D1P0DN82 309 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 IL9P15248 144 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 MUC1P15941 1255 aaPredicted RBP2.76□□□□□ -1.97
GTF3A-208ENST00000493903 ALOX5APP20292 161 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 EVI2BP34910 448 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 CAPZBP47756 277 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 EMX1Q04741 257 aaPredicted RBP2.76□□□□□ -1.97
GTF3A-208ENST00000493903 SPIN3Q5JUX0 258 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 OR10K2Q6IF99 312 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 IGFL2Q6UWQ7 119 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 TCF23Q7RTU1 214 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 DOLPP1Q86YN1 238 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 AMN1Q8IY45 258 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 KRTCAP2Q8N6L1 136 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 TMEM105Q8N8V8 129 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 TMEM75Q8N9X5 138 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 FER1L6-AS1Q8NA97 138 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 APCDD1LQ8NCL9 501 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 SPPL2BQ8TCT7 592 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 CMBLQ96DG6 245 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 SLC35G5Q96KT7 338 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 TRIB3Q96RU7 358 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 SHANK2-AS3Q9BTD1 123 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 OR51I1Q9H343 314 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 LINC00574Q9H8X3 128 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 HDGFL3Q9Y3E1 203 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 CACNA1HO95180 2353 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 TRIP11Q15643 1979 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 LCTP09848 1927 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 TICRRQ7Z2Z1 1910 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 TECTAO75443 2155 aa2.76□□□□□ -1.97
GTF3A-208ENST00000493903 SPTBN4Q9H254 2564 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 KMT2BQ9UMN6 2715 aaPredicted RBP2.75□□□□□ -1.97
GTF3A-208ENST00000493903 IGHV3OR15-7A0A075B7D8 119 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 TRAV8-1A0A0A6YYK1 113 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 NRASP01111 189 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 HRASP01112 189 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 KRASP01116 189 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 ZNF708P17019 499 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 OR4D2P58180 307 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 GABARAPL2P60520 117 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 TMEM267Q0VDI3 215 aaPredicted RBP2.75□□□□□ -1.97
GTF3A-208ENST00000493903 FUT5Q11128 374 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 RSU1Q15404 277 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 SPA17Q15506 151 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 ABCA11PQ4W5N1 156 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 ACSBG2Q5FVE4 666 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 HES3Q5TGS1 186 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 LAIR2Q6ISS4 152 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 EBLN2Q6P2I7 272 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 Q6P435 159 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 SFXN4Q6P4A7 337 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 TIFABQ6ZNK6 161 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 LRRC25Q8N386 305 aaPredicted RBP2.75□□□□□ -1.97
GTF3A-208ENST00000493903 YIPF7Q8N8F6 280 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 ZFP62Q8NB50 900 aaPredicted RBP2.75□□□□□ -1.97
GTF3A-208ENST00000493903 ST20-AS1Q8NBB2 130 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 OR2V1Q8NHB1 315 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 PHOSPHO2Q8TCD6 241 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 KCTD4Q8WVF5 259 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 OR2V2Q96R30 315 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 SDHCQ99643 169 aaPredicted RBP2.75□□□□□ -1.97
GTF3A-208ENST00000493903 ALX4Q9H161 411 aaPredicted RBP2.75□□□□□ -1.97
GTF3A-208ENST00000493903 ZNF492Q9P255 531 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 VPS29Q9UBQ0 182 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 DNAH14Q0VDD8 3507 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 ATG2AQ2TAZ0 1938 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 PLXNA3P51805 1871 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 SIP14410 1827 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 NUP205Q92621 2012 aa2.75□□□□□ -1.97
GTF3A-208ENST00000493903 GVINP1Q7Z2Y8 2422 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 MCM3APO60318 1980 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 TP53BP1Q12888 1972 aaPredicted RBP2.74□□□□□ -1.97
GTF3A-208ENST00000493903 SCN10AQ9Y5Y9 1956 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 ZFHX2Q9C0A1 2572 aaPredicted RBP2.74□□□□□ -1.97
GTF3A-208ENST00000493903 EPG5Q9HCE0 2579 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 VPS13AQ96RL7 3174 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 ZBED9Q6R2W3 1325 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 OR5H14A6NHG9 310 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 CLDN24A6NM45 220 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 FADS1O60427 444 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 OR5F1O95221 314 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 GPR75O95800 540 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 PDYNP01213 254 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 TNNC2P02585 160 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 OR13C7P0DN81 318 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 NPY1RP25929 384 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 TGFBR1P36897 503 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 HSPA9P38646 679 aaKnown RBP2.74□□□□□ -1.97
GTF3A-208ENST00000493903 HLA-DRB3P79483 266 aa2.74□□□□□ -1.97
GTF3A-208ENST00000493903 DEFB103AP81534 67 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms