RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RNF150Q9ULK6 438 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ZGRF1Q86YA3 2104 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 M0R143 59 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 SPRY3O43610 288 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 RNF2Q99496 336 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 OR2D2Q9H210 308 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 DNAJC4Q9NNZ3 241 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 A0A0G2JNJ9 132 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 RNF212BA8MTL3 300 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 M0QZK8 103 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 ZNF737O75373 536 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 IGKV1-5P01602 117 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 SSTR5P35346 364 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 CDX1P47902 265 aaPredicted RBP11.48□□□□□ -0.57
VCP-207ENST00000493886 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
VCP-207ENST00000493886 TBR1Q16650 682 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 MOGAT3Q86VF5 341 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 GCSAMQ8N6F7 178 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 ZBTB34Q8NCN2 500 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 NIPSNAP3BQ9BS92 247 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 Q9UFV3 132 aa11.48□□□□□ -0.57
VCP-207ENST00000493886 IGKV1D-17A0A075B6S4 117 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 KIAA1324LA8MWY0 1029 aaPredicted RBP11.47□□□□□ -0.57
VCP-207ENST00000493886 IFNA17P01571 189 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 HOXA5P20719 270 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 CCKARP32238 428 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 PAX5Q02548 391 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 EDDM3AQ14507 147 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 FAM90A1Q86YD7 464 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 CLDND2Q8NHS1 167 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 GNPNAT1Q96EK6 184 aaPredicted RBP11.47□□□□□ -0.57
VCP-207ENST00000493886 HMGB3O15347 200 aaKnown RBP11.47□□□□□ -0.57
VCP-207ENST00000493886 CYB5BO43169 146 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 RPLP1P05386 114 aaKnown RBP11.47□□□□□ -0.57
VCP-207ENST00000493886 PAX1P15863 534 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 MDKP21741 143 aaPredicted RBP11.47□□□□□ -0.57
VCP-207ENST00000493886 CD40P25942 277 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 RPS16P62249 146 aaKnown RBP11.47□□□□□ -0.57
VCP-207ENST00000493886 ARL16Q0P5N6 197 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 SSX7Q7RTT5 188 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 MRGPRGQ86SM5 289 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 ZNF664Q8N3J9 261 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 ITLN1Q8WWA0 313 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 DCTN5Q9BTE1 182 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 CSTL1Q9H114 145 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 CBLN4Q9NTU7 201 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 CUL9Q8IWT3 2517 aa11.47□□□□□ -0.57
VCP-207ENST00000493886 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 TAS2R30P59541 319 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 BAXQ07812 192 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 GFRALQ6UXV0 394 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 RFESDQ8TAC1 157 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 C5orf30Q96GV9 206 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 FAM210BQ96KR6 192 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 ZNF430Q9H8G1 570 aaPredicted RBP11.46□□□□□ -0.57
VCP-207ENST00000493886 IFNA5P01569 189 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 TLE4Q04727 773 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 ELOBQ15370 118 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 C4orf17Q53FE4 359 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 LEMD1Q68G75 181 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 ZNF808Q8N4W9 903 aaPredicted RBP11.46□□□□□ -0.57
VCP-207ENST00000493886 BEND2Q8NDZ0 799 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 ZNF596Q8TC21 504 aa11.46□□□□□ -0.57
VCP-207ENST00000493886 IGHV3-43A0A0B4J1X8 118 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 K7ENP7 123 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 IGHV3-43DP0DP04 118 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 GZMHP20718 246 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 SELENOVP59797 346 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 TRAT1Q6PIZ9 186 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 SNX22Q96L94 193 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 YPEL4Q96NS1 127 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 RAB40CQ96S21 281 aa11.46□□□□□ -0.58
VCP-207ENST00000493886 C15orf65H3BRN8 121 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 SPINT2O43291 252 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 EIF4EBP1Q13541 118 aaPredicted RBP11.45□□□□□ -0.58
VCP-207ENST00000493886 SPANXN5Q5MJ07 72 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 GFI1BQ5VTD9 330 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 PPP1R35Q8TAP8 253 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 DOK5Q9P104 306 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 A0A1B0GW64 132 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 LHBP01229 141 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 RPL30P62888 115 aaKnown RBP11.45□□□□□ -0.58
VCP-207ENST00000493886 NHLH1Q02575 133 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 OR5I1Q13606 314 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 ZNF787Q6DD87 383 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 OR8G2PQ6IF36 304 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 FGFRL1Q8N441 504 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 OR1L6Q8NGR2 347 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 TVP23CQ96ET8 276 aa11.45□□□□□ -0.58
VCP-207ENST00000493886 ODAMA1E959 279 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 C16orf97H3BN30 126 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 MGST3O14880 152 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 TRGC2P03986 189 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 GATA4P43694 442 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 SCGB1C1Q8TD33 95 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 ELOVL5Q9NYP7 299 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 PSENENQ9NZ42 101 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 PLCE1Q9P212 2302 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms