RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 NMNAT3Q96T66 252 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 CHCHD7Q9BUK0 85 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 CCDC32Q9BV29 185 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 CCDC90BQ9GZT6 254 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 PBOV1Q9GZY1 135 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 TPT1P8Q9HAU6 139 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 GPR84Q9NQS5 396 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 TMEM38BQ9NVV0 291 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 SPANXCQ9NY87 97 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 AK3Q9UIJ7 227 aa2.12□□□□□ -2.07
VPS36-205ENST00000492650 CHD2O14647 1828 aaKnown RBP2.12□□□□□ -2.07
VPS36-205ENST00000492650 SMARCA2P51531 1590 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 IGHV3-49A0A0A0MS15 119 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 TRAV4A0A0B4J268 109 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 NKX2-6A6NCS4 301 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 A8MUN3 132 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 COX7A2LO14548 114 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 GSTZ1O43708 216 aaPredicted RBP2.11□□□□□ -2.07
VPS36-205ENST00000492650 CST8O60676 142 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 CCNKO75909 580 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 GADD45GO95257 159 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 PDYNP01213 254 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 CSN2P05814 226 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 BPGMP07738 259 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 RBP1P09455 135 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 PPIBP23284 216 aaKnown RBP2.11□□□□□ -2.07
VPS36-205ENST00000492650 S100A2P29034 98 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 CMC4P56277 68 aaPredicted RBP2.11□□□□□ -2.07
VPS36-205ENST00000492650 WNT4P56705 351 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 HOXC5Q00444 222 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 PDGFRLQ15198 375 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 GRK1Q15835 563 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 IL17AQ16552 155 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 RPL13AP3Q6NVV1 102 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 Q6ZS49 121 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 TCF24Q7RTU0 167 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 KRTCAP2Q8N6L1 136 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 OR4D11Q8NGI4 311 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 OR9Q1Q8NGQ5 310 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 OR13C8Q8NGS7 320 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 SGMS2Q8NHU3 365 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 C2orf15Q8WU43 125 aaKnown RBP2.11□□□□□ -2.07
VPS36-205ENST00000492650 MAL2Q969L2 176 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 MALSU1Q96EH3 234 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 PDXPQ96GD0 296 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 CAPZA3Q96KX2 299 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 IGF2BP2-AS1Q96M15 143 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 FOPNLQ96NB1 174 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 CCDC115Q96NT0 180 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 ERMAPQ96PL5 475 aaPredicted RBP2.11□□□□□ -2.07
VPS36-205ENST00000492650 TRIB3Q96RU7 358 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 ZNF382Q96SR6 550 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 NRTNQ99748 197 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 SEC22CQ9BRL7 303 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 C20orf27Q9GZN8 174 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 MRPS16Q9Y3D3 137 aaKnown RBP2.11□□□□□ -2.07
VPS36-205ENST00000492650 ASB4Q9Y574 426 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 WDR7Q9Y4E6 1490 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 THSD7AQ9UPZ6 1657 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 PTPRJQ12913 1337 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 CHD4Q14839 1912 aa2.11□□□□□ -2.07
VPS36-205ENST00000492650 RAI1Q7Z5J4 1906 aaPredicted RBP2.11□□□□□ -2.07
VPS36-205ENST00000492650 ABCC12Q96J65 1359 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 TET2Q6N021 2002 aaPredicted RBP2.1□□□□□ -2.07
VPS36-205ENST00000492650 TRBV19A0A075B6N1 114 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 IGHV3OR15-7A0A075B7D8 119 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 A0A087WX48 190 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 IGHV3-64DA0A0J9YX35 117 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 LINC00862A6NCI5 91 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 RIIAD1A6NNX1 92 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 K7EP13 123 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 DEGS1O15121 323 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 PIAS1O75925 651 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 OR2J2O76002 312 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 HLA-DQA1P01909 254 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 APOC1P02654 83 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 CD7P09564 240 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 SMIM10L2AP0DMW4 78 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 SMIM10L2BP0DMW5 78 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 RPS4Y1P22090 263 aaKnown RBP2.1□□□□□ -2.07
VPS36-205ENST00000492650 S100A7P31151 101 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 SDC4P31431 198 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 PPP1CCP36873 323 aaKnown RBP2.1□□□□□ -2.07
VPS36-205ENST00000492650 ATP5G3P48201 142 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 PSMD8P48556 350 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 LHX2P50458 406 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 EMP1P54849 157 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 CKS1BP61024 79 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 FGF12P61328 243 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 TBPL1P62380 186 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 RPS28P62857 69 aaKnown RBP2.1□□□□□ -2.07
VPS36-205ENST00000492650 RHEBQ15382 184 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 LTC4SQ16873 150 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 SCGB2B2Q4G0G5 96 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 TNFAIP8L3Q5GJ75 292 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 ZNF678Q5SXM1 525 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 GLT8D1Q68CQ7 371 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 Q6Q795 121 aa2.1□□□□□ -2.07
VPS36-205ENST00000492650 NTM-AS1Q6ZSK4 140 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms