RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 IFITM3Q01628 133 aa13.25□□□□□ -0.29
SFXN5-220ENST00000490056 AWAT1Q58HT5 328 aa13.25□□□□□ -0.29
SFXN5-220ENST00000490056 LIN54Q6MZP7 749 aa13.25□□□□□ -0.29
SFXN5-220ENST00000490056 C7orf50Q9BRJ6 194 aaKnown RBP13.25□□□□□ -0.29
SFXN5-220ENST00000490056 SERTAD4Q9NUC0 356 aa13.25□□□□□ -0.29
SFXN5-220ENST00000490056 RNF114Q9Y508 228 aa13.25□□□□□ -0.29
SFXN5-220ENST00000490056 LYRM1O43325 122 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 SPDEFO95238 335 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 HPRT1P00492 218 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 SAA1P0DJI8 122 aaPredicted RBP13.24□□□□□ -0.29
SFXN5-220ENST00000490056 RPA2P15927 270 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 PJVKQ0ZLH3 352 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 KRTAP21-3Q3LHN1 58 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 SP6Q3SY56 376 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 SSX9Q7RTT3 188 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 CCDC71LQ8N9Z2 235 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 CD300LFQ8TDQ1 290 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 TMEM230Q96A57 120 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 SCGB3A2Q96PL1 93 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 TP53RKQ96S44 253 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 TBC1D24Q9ULP9 559 aa13.24□□□□□ -0.29
SFXN5-220ENST00000490056 TEX13DA0A0J9YY54 714 aaPredicted RBP13.23□□□□□ -0.29
SFXN5-220ENST00000490056 C3orf85A0A1B0GTC6 90 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 HAX1O00165 279 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 IGHG2P01859 326 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 HLA-DRB1P01911 266 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 VDAC2P45880 294 aaPredicted RBP13.23□□□□□ -0.29
SFXN5-220ENST00000490056 UBE2KP61086 200 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 VMA21Q3ZAQ7 101 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 SLC35E3Q7Z769 313 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 TCTEX1D1Q8N7M0 179 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 SLC25A21Q9BQT8 299 aaPredicted RBP13.23□□□□□ -0.29
SFXN5-220ENST00000490056 LINC00527Q9UJ94 153 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 MMP24Q9Y5R2 645 aa13.23□□□□□ -0.29
SFXN5-220ENST00000490056 IGHV7-81A0A0B4J1V7 117 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 HRASP01112 189 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 IGKV1-39P01597 117 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 IGKV1D-39P04432 117 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 AKR1C4P17516 323 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 CX3CL1P78423 397 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 RBMS2Q15434 407 aaKnown RBP13.22□□□□□ -0.29
SFXN5-220ENST00000490056 MRGPRG-AS1Q2M3A8 158 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 TMED4Q7Z7H5 227 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 PPP1R27Q86WC6 154 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 TEX45Q8NA69 505 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 R3HDM4Q96D70 268 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 RHOVQ96L33 236 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 NOL4LQ96MY1 436 aaPredicted RBP13.22□□□□□ -0.29
SFXN5-220ENST00000490056 NAA60Q9H7X0 242 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 PLEKHA2Q9HB19 425 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 FLVCR2Q9UPI3 526 aa13.22□□□□□ -0.29
SFXN5-220ENST00000490056 A0A1B0GUS0 222 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 CRYM-AS1A6NIL9 109 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 H0Y980 276 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 NDUFB6O95139 128 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 CA2P00918 260 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 NQO2P16083 231 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 COMPP49747 757 aaPredicted RBP13.21□□□□□ -0.29
SFXN5-220ENST00000490056 PROK1P58294 105 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 TAS2R31P59538 309 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 GNB1P62873 340 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 NDPQ00604 133 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 ASAH1Q13510 395 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 PUSL1Q8N0Z8 303 aaKnown RBP13.21□□□□□ -0.29
SFXN5-220ENST00000490056 COMMD9Q9P000 198 aa13.21□□□□□ -0.29
SFXN5-220ENST00000490056 TNCP24821 2201 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 ARPC1BO15143 372 aaKnown RBP13.2□□□□□ -0.3
SFXN5-220ENST00000490056 OR2A4O95047 310 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 KRASP01116 189 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 SERPINE2P07093 398 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 OR5AC1P0C628 307 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 G6PCP35575 357 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 KRTAP10-3P60369 221 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 PRSS8Q16651 343 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 OR4A47Q6IF82 309 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 C12orf54Q6X4T0 127 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 SGPP2Q8IWX5 399 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 KLHDC1Q8N7A1 406 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 OR2A7Q96R45 310 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 TSC22D3Q99576 134 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 OR51J1Q9H342 316 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 ZNF430Q9H8G1 570 aaPredicted RBP13.2□□□□□ -0.3
SFXN5-220ENST00000490056 PARP11Q9NR21 331 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 FAM212BQ9NTI7 297 aaPredicted RBP13.2□□□□□ -0.3
SFXN5-220ENST00000490056 FBXO7Q9Y3I1 522 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 TENM1Q9UKZ4 2725 aa13.2□□□□□ -0.3
SFXN5-220ENST00000490056 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 ATP6V0E1O15342 81 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
SFXN5-220ENST00000490056 SSBP2P81877 361 aaPredicted RBP13.19□□□□□ -0.3
SFXN5-220ENST00000490056 SRSF4Q08170 494 aaKnown RBP13.19□□□□□ -0.3
SFXN5-220ENST00000490056 POU2AF1Q16633 256 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 C10orf99Q6UWK7 81 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 CENPSQ8N2Z9 138 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 DMBX1Q8NFW5 382 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 ABHD5Q8WTS1 349 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 GLYATL2Q8WU03 294 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 WNT10AQ9GZT5 417 aa13.19□□□□□ -0.3
SFXN5-220ENST00000490056 TMEM140Q9NV12 185 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms