RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TRAV1-1A0A0B4J248 108 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 TRGC1P0CF51 173 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 DUTP33316 252 aaKnown RBP13.03□□□□□ -0.32
BRD9-208ENST00000489816 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
BRD9-208ENST00000489816 OR10D4PQ8NGN7 298 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 FAM122AQ96E09 287 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 GAB2Q9UQC2 676 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 SLC25A15Q9Y619 301 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 EIF4EBP1Q13541 118 aaPredicted RBP13.02□□□□□ -0.32
BRD9-208ENST00000489816 OR4A16Q8NH70 328 aa13.02□□□□□ -0.32
BRD9-208ENST00000489816 COL6A6A6NMZ7 2263 aa13.02□□□□□ -0.32
BRD9-208ENST00000489816 C15orf62A8K5M9 175 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 CLDN34H7C241 214 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 SOD3P08294 240 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 KITLGP21583 273 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 DPPA3Q6W0C5 159 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 PIP4P1Q86T03 277 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 MEGF10Q96KG7 1140 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 DERL1Q9BUN8 251 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 PARLQ9H300 379 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 WASF3Q9UPY6 502 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 P0C879 139 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 CCL8P80075 99 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 C16orf82Q7Z2V1 217 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 ZADH2Q8N4Q0 377 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 PINX1Q96BK5 328 aaKnown RBP13.02□□□□□ -0.33
BRD9-208ENST00000489816 CCL13Q99616 98 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 TOLLIPQ9H0E2 274 aa13.02□□□□□ -0.33
BRD9-208ENST00000489816 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 CGAP01215 116 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 CHRNA7P36544 502 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 PSMB3P49720 205 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 LYG1Q8N1E2 194 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 A0A0U1RQK1 487 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 MMP23AO75900 390 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 IGLV1-44P01699 117 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 S100A8P05109 93 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 GGACTQ9BVM4 153 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 OR6C3Q9NZP0 311 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 LAMP3Q9UQV4 416 aa13.01□□□□□ -0.33
BRD9-208ENST00000489816 SPTAN1Q13813 2472 aaKnown RBP13□□□□□ -0.33
BRD9-208ENST00000489816 NAV3Q8IVL0 2385 aa13□□□□□ -0.33
BRD9-208ENST00000489816 ATP5G3P48201 142 aa13□□□□□ -0.33
BRD9-208ENST00000489816 PRSS8Q16651 343 aa13□□□□□ -0.33
BRD9-208ENST00000489816 MIC13Q5XKP0 118 aa13□□□□□ -0.33
BRD9-208ENST00000489816 FAM216BQ8N7L0 139 aa13□□□□□ -0.33
BRD9-208ENST00000489816 LURAP1Q96LR2 239 aa13□□□□□ -0.33
BRD9-208ENST00000489816 HSD17B10Q99714 261 aaKnown RBP13□□□□□ -0.33
BRD9-208ENST00000489816 FAM215AQ9Y5M1 114 aa13□□□□□ -0.33
BRD9-208ENST00000489816 SPTBN1Q01082 2364 aaKnown RBP13□□□□□ -0.33
BRD9-208ENST00000489816 SRRM5B3KS81 715 aa13□□□□□ -0.33
BRD9-208ENST00000489816 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
BRD9-208ENST00000489816 TM4SF5O14894 197 aa13□□□□□ -0.33
BRD9-208ENST00000489816 RAB29O14966 203 aa13□□□□□ -0.33
BRD9-208ENST00000489816 KLK10O43240 276 aa13□□□□□ -0.33
BRD9-208ENST00000489816 GYPAP02724 150 aa13□□□□□ -0.33
BRD9-208ENST00000489816 FABP4P15090 132 aa13□□□□□ -0.33
BRD9-208ENST00000489816 S100PP25815 95 aa13□□□□□ -0.33
BRD9-208ENST00000489816 CD1BP29016 333 aa13□□□□□ -0.33
BRD9-208ENST00000489816 KLF3P57682 345 aaPredicted RBP13□□□□□ -0.33
BRD9-208ENST00000489816 NKX6-1P78426 367 aaPredicted RBP13□□□□□ -0.33
BRD9-208ENST00000489816 TMEM241Q24JQ0 296 aa13□□□□□ -0.33
BRD9-208ENST00000489816 PYY3Q5JQD4 70 aa13□□□□□ -0.33
BRD9-208ENST00000489816 C1orf87Q8N0U7 546 aa13□□□□□ -0.33
BRD9-208ENST00000489816 ZBTB34Q8NCN2 500 aa13□□□□□ -0.33
BRD9-208ENST00000489816 RND1Q92730 232 aa13□□□□□ -0.33
BRD9-208ENST00000489816 DCHS2Q6V1P9 2916 aa13□□□□□ -0.33
BRD9-208ENST00000489816 AHRRA9YTQ3 701 aa13□□□□□ -0.33
BRD9-208ENST00000489816 IFNA1P01562 189 aa13□□□□□ -0.33
BRD9-208ENST00000489816 SMIM6P0DI80 62 aa13□□□□□ -0.33
BRD9-208ENST00000489816 MALSU1Q96EH3 234 aa13□□□□□ -0.33
BRD9-208ENST00000489816 S1PR3Q99500 378 aa13□□□□□ -0.33
BRD9-208ENST00000489816 ZNF251Q9BRH9 671 aa13□□□□□ -0.33
BRD9-208ENST00000489816 MRPL37Q9BZE1 423 aaKnown RBP13□□□□□ -0.33
BRD9-208ENST00000489816 SEBOXQ9HB31 216 aaPredicted RBP13□□□□□ -0.33
BRD9-208ENST00000489816 COL12A1Q99715 3063 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 A0A087WWC5 75 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 PIGBOS1A0A0B4J2F0 54 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 FAM3BP58499 235 aaPredicted RBP12.99□□□□□ -0.33
BRD9-208ENST00000489816 C9orf152Q5JTZ5 239 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 ACTR3CQ9C0K3 210 aaPredicted RBP12.99□□□□□ -0.33
BRD9-208ENST00000489816 CTXND1A0A1B0GTU2 59 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 HOXA5P20719 270 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 NPPCP23582 126 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 S100A2P29034 98 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 RPL23P62829 140 aaKnown RBP12.99□□□□□ -0.33
BRD9-208ENST00000489816 BSXQ3C1V8 233 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 MOB3BQ86TA1 216 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 CALYQ9NYX4 217 aa12.99□□□□□ -0.33
BRD9-208ENST00000489816 GZMHP20718 246 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 CDC34P49427 236 aaPredicted RBP12.98□□□□□ -0.33
BRD9-208ENST00000489816 LOXL3P58215 753 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 PRR7Q8TB68 274 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 RHOVQ96L33 236 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 PCGF1Q9BSM1 259 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 TMEM140Q9NV12 185 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 A0A1W2PPV4 95 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 C11orf94C9JXX5 98 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 IFNL4K9M1U5 179 aa12.98□□□□□ -0.33
BRD9-208ENST00000489816 PRB3Q04118 309 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms