RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RHOVQ96L33 236 aa16.84■□□□□ 0.29
SND1-214ENST00000489417 HARBI1Q96MB7 349 aa16.84■□□□□ 0.29
SND1-214ENST00000489417 AIFM2Q9BRQ8 373 aa16.84■□□□□ 0.29
SND1-214ENST00000489417 ZFP57Q9NU63 452 aa16.84■□□□□ 0.29
SND1-214ENST00000489417 TMEM140Q9NV12 185 aa16.84■□□□□ 0.29
SND1-214ENST00000489417 COA4Q9NYJ1 87 aa16.84■□□□□ 0.29
SND1-214ENST00000489417 CR1P17927 2039 aa16.84■□□□□ 0.29
SND1-214ENST00000489417 MED13LQ71F56 2210 aa16.83■□□□□ 0.29
SND1-214ENST00000489417 MBPP02686 304 aaPredicted RBP16.83■□□□□ 0.28
SND1-214ENST00000489417 GPR157Q5UAW9 335 aa16.83■□□□□ 0.28
SND1-214ENST00000489417 CYB5R2Q6BCY4 276 aa16.83■□□□□ 0.28
SND1-214ENST00000489417 C11orf87Q6NUJ2 197 aa16.83■□□□□ 0.28
SND1-214ENST00000489417 DYNAPQ8N1N2 210 aa16.83■□□□□ 0.28
SND1-214ENST00000489417 THAP6Q8TBB0 222 aa16.83■□□□□ 0.28
SND1-214ENST00000489417 C17orf50Q8WW18 174 aa16.83■□□□□ 0.28
SND1-214ENST00000489417 CFHR4Q92496 578 aa16.83■□□□□ 0.28
SND1-214ENST00000489417 MS4A7Q9GZW8 240 aaPredicted RBP16.83■□□□□ 0.28
SND1-214ENST00000489417 NBPF19A0A087WUL8 3843 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 IGHV3OR16-10A0A075B7F0 116 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 FXYD6-FXYD2A0A087WZ82 144 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 FAM90A9PA6NNJ1 464 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 PET100P0DJ07 73 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 SLC25A4P12235 298 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 CD1BP29016 333 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 NKX2-1P43699 371 aaPredicted RBP16.82■□□□□ 0.28
SND1-214ENST00000489417 ARHGDIBP52566 201 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 RPS16P62249 146 aaKnown RBP16.82■□□□□ 0.28
SND1-214ENST00000489417 RUSC1-AS1Q66K80 236 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 FOXRED2Q8IWF2 684 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 PIP4P2Q8N4L2 257 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 AJUBAQ96IF1 538 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 MBD2Q9UBB5 411 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 LSM5Q9Y4Y9 91 aaKnown RBP16.82■□□□□ 0.28
SND1-214ENST00000489417 POMT1Q9Y6A1 747 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 HECTD1Q9ULT8 2610 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 CSMD2Q7Z408 3487 aa16.82■□□□□ 0.28
SND1-214ENST00000489417 SRRM4A7MD48 611 aaKnown RBP16.81■□□□□ 0.28
SND1-214ENST00000489417 H0YIZ8 118 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 K7EPK0 472 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 ST8SIA3O43173 380 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 AVPP01185 164 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 OR9G9P0C7N8 305 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 IGHV4-38-2P0DP08 117 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 HABP2Q14520 560 aaPredicted RBP16.81■□□□□ 0.28
SND1-214ENST00000489417 CXorf66Q5JRM2 361 aaPredicted RBP16.81■□□□□ 0.28
SND1-214ENST00000489417 OR4A47Q6IF82 309 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 PRSS54Q6PEW0 395 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 CIARTQ8N365 385 aaPredicted RBP16.81■□□□□ 0.28
SND1-214ENST00000489417 FAM71E2Q8N5Q1 922 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 GRPEL2Q8TAA5 225 aa16.81■□□□□ 0.28
SND1-214ENST00000489417 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.81■□□□□ 0.28
SND1-214ENST00000489417 VENTXO95231 258 aa16.8■□□□□ 0.28
SND1-214ENST00000489417 RLN2P04090 185 aa16.8■□□□□ 0.28
SND1-214ENST00000489417 PAX6P26367 422 aa16.8■□□□□ 0.28
SND1-214ENST00000489417 ID3Q02535 119 aa16.8■□□□□ 0.28
SND1-214ENST00000489417 RNF126Q9BV68 326 aa16.8■□□□□ 0.28
SND1-214ENST00000489417 PRRC2AP48634 2157 aaKnown RBP16.8■□□□□ 0.28
SND1-214ENST00000489417 SMAD7O15105 426 aaKnown RBP16.79■□□□□ 0.28
SND1-214ENST00000489417 DEDDO75618 318 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 NXPH3O95157 252 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 SAA1P0DJI8 122 aaPredicted RBP16.79■□□□□ 0.28
SND1-214ENST00000489417 LYL1P12980 280 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 LGALS7P47929 136 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 KLF17Q5JT82 389 aaPredicted RBP16.79■□□□□ 0.28
SND1-214ENST00000489417 OR4A16Q8NH70 328 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 OR5AC2Q9NZP5 309 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 RCL1Q9Y2P8 373 aaKnown RBP16.79■□□□□ 0.28
SND1-214ENST00000489417 NSG2Q9Y328 171 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 FLNBO75369 2602 aaKnown RBP16.79■□□□□ 0.28
SND1-214ENST00000489417 HMSDA8MTL9 139 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 FAM90A26D6RGX4 464 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 RBMXL2O75526 392 aaKnown RBP16.79■□□□□ 0.28
SND1-214ENST00000489417 SNAPC5O75971 98 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 IGLV2-23P01705 113 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 IL6RP08887 468 aaPredicted RBP16.79■□□□□ 0.28
SND1-214ENST00000489417 POLR2GP62487 172 aaKnown RBP eCLIP16.79■□□□□ 0.28
SND1-214ENST00000489417 RELBQ01201 579 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 TMEM65Q6PI78 240 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 BRD3OSQ6XYD6 125 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 PUSL1Q8N0Z8 303 aaKnown RBP16.79■□□□□ 0.28
SND1-214ENST00000489417 RITA1Q96K30 269 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 RNF5Q99942 180 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 BET1LQ9NYM9 111 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 ITGB1BP2Q9UKP3 347 aa16.79■□□□□ 0.28
SND1-214ENST00000489417 WNK2Q9Y3S1 2297 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 TRAV3A0A0B4J244 114 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 WRBO00258 174 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 UPK2O00526 184 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 OR2B8PP59922 312 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 UBE2KP61086 200 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 VMA21Q3ZAQ7 101 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 ZNF546Q86UE3 836 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 VSTM2AQ8TAG5 236 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 DCUN1D4Q92564 292 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 TSNAXQ99598 290 aaKnown RBP16.78■□□□□ 0.28
SND1-214ENST00000489417 MAGT1Q9H0U3 335 aa16.78■□□□□ 0.28
SND1-214ENST00000489417 ARPC5O15511 151 aa16.77■□□□□ 0.27
SND1-214ENST00000489417 IGKV1D-33P01593 117 aa16.77■□□□□ 0.27
SND1-214ENST00000489417 IGKV1-33P01594 117 aa16.77■□□□□ 0.27
SND1-214ENST00000489417 AARDQ4LEZ3 155 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms