RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 GPHA2Q96T91 129 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 SLC25A21Q9BQT8 299 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-224ENST00000488927 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 PLEKHA2Q9HB19 425 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 SERTAD4Q9NUC0 356 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 SIGLEC9Q9Y336 463 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 SH2D7A6NKC9 451 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-224ENST00000488927 AP4M1O00189 453 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 MPPED1O15442 326 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 SLC25A17O43808 307 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 BRWD1-AS2P59051 145 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 PPP1R27Q86WC6 154 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 CHPT1Q8WUD6 406 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 MRGPRFQ96AM1 343 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 GON7Q9BXV9 100 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 COMMD9Q9P000 198 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 ZNF580Q9UK33 172 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 GPR132Q9UNW8 380 aa12.64□□□□□ -0.39
HDAC7-224ENST00000488927 SRRM4A7MD48 611 aaKnown RBP12.63□□□□□ -0.39
HDAC7-224ENST00000488927 HAX1O00165 279 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 RAMP3O60896 148 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 NQO2P16083 231 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 ZNF562Q6V9R5 426 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 KLHDC1Q8N7A1 406 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 WFDC12Q8WWY7 111 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 RHOVQ96L33 236 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 WNT10AQ9GZT5 417 aa12.63□□□□□ -0.39
HDAC7-224ENST00000488927 H0Y980 276 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 OR2A4O95047 310 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 IGF1P05019 195 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 CRYGBP07316 175 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 VSIG10L2P0DP72 767 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 RPA2P15927 270 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 PI3P19957 117 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 OR4A5Q8NH83 315 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 OR2A7Q96R45 310 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 HSPB9Q9BQS6 159 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 OR51J1Q9H342 316 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 C5orf66Q9H5L9 145 aa12.62□□□□□ -0.39
HDAC7-224ENST00000488927 IGHV7-81A0A0B4J1V7 117 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 C3orf85A0A1B0GTC6 90 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 SERPINE2P07093 398 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 SAA1P0DJI8 122 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-224ENST00000488927 ERVK-16P61578 105 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 SLC35B1P78383 322 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 CX3CL1P78423 397 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 RBMS2Q15434 407 aaKnown RBP12.61□□□□□ -0.39
HDAC7-224ENST00000488927 POU2AF1Q16633 256 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 TMEM95Q3KNT9 176 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 SHISA2Q6UWI4 295 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 CENPVQ7Z7K6 275 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-224ENST00000488927 MMD2Q8IY49 270 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 CADM3Q8N126 398 aa12.61□□□□□ -0.39
HDAC7-224ENST00000488927 RTBDNQ9BSG5 229 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-224ENST00000488927 TEX13DA0A0J9YY54 714 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-224ENST00000488927 ACTL6BO94805 426 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 ATG12O94817 140 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 KBTBD11O94819 623 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 S1PR2O95136 353 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 CA2P00918 260 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 FGF2P09038 288 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 VDAC1P21796 283 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 LPAR6P43657 344 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 PRSS8Q16651 343 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 PUSL1Q8N0Z8 303 aaKnown RBP12.6□□□□□ -0.39
HDAC7-224ENST00000488927 STPG2Q8N412 459 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 DMBX1Q8NFW5 382 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 R3HDM4Q96D70 268 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 CLCC1Q96S66 551 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 NAA60Q9H7X0 242 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 PARP11Q9NR21 331 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 BET1LQ9NYM9 111 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 VSIG4Q9Y279 399 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 KCNIP3Q9Y2W7 256 aa12.6□□□□□ -0.39
HDAC7-224ENST00000488927 LINC00854A0A1B0GVQ3 168 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 PSMB11A5LHX3 300 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 CRYM-AS1A6NIL9 109 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 MARCH11A6NNE9 402 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 FCN1O00602 326 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 LYRM1O43325 122 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 CNIH1O95406 144 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 MAS1LP35410 378 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 TMEM267Q0VDI3 215 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-224ENST00000488927 FXYD3Q14802 87 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 ZNF585BQ52M93 769 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 OR4A47Q6IF82 309 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 SGPP2Q8IWX5 399 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 VKORC1L1Q8N0U8 176 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 COMMD1Q8N668 190 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 ARPC1AQ92747 370 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 TPSG1Q9NRR2 321 aa12.59□□□□□ -0.39
HDAC7-224ENST00000488927 PIGBOS1A0A0B4J2F0 54 aa12.58□□□□□ -0.4
HDAC7-224ENST00000488927 LINC01548A6NM66 108 aa12.58□□□□□ -0.4
HDAC7-224ENST00000488927 ATP6V0E1O15342 81 aa12.58□□□□□ -0.4
HDAC7-224ENST00000488927 UPK1BO75841 260 aa12.58□□□□□ -0.4
HDAC7-224ENST00000488927 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-224ENST00000488927 GNB1P62873 340 aa12.58□□□□□ -0.4
HDAC7-224ENST00000488927 DHODHQ02127 395 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms