RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 AP4M1O00189 453 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 MPPED1O15442 326 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 RBFOX2O43251 390 aaKnown RBP eCLIP12.46□□□□□ -0.41
C9orf3-219ENST00000488186 CNIH1O95406 144 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 HLA-DRB1P01911 266 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 CTSDP07339 412 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-219ENST00000488186 IL7P13232 177 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 F2RP25116 425 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 PROK1P58294 105 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 UBE2KP61086 200 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 GNB1P62873 340 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 PPP1R27Q86WC6 154 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 TEX45Q8NA69 505 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 VSTM2AQ8TAG5 236 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 CCDC32Q9BV29 185 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 ZNF747Q9BV97 191 aa12.46□□□□□ -0.41
C9orf3-219ENST00000488186 TEX13DA0A0J9YY54 714 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-219ENST00000488186 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
C9orf3-219ENST00000488186 CREBL2O60519 120 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-219ENST00000488186 RAMP3O60896 148 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 ACTL6BO94805 426 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 IGLV2-23P01705 113 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 SERPINE2P07093 398 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 LPAR6P43657 344 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 ERVK-16P61578 105 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 RND3P61587 244 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 SLC35B1P78383 322 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 SSX9Q7RTT3 188 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 DMBX1Q8NFW5 382 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 CHPT1Q8WUD6 406 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 SDHCQ99643 169 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-219ENST00000488186 HSPB9Q9BQS6 159 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 GON7Q9BXV9 100 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 OR51J1Q9H342 316 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 PARP11Q9NR21 331 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 LINC00527Q9UJ94 153 aa12.45□□□□□ -0.42
C9orf3-219ENST00000488186 LINC01548A6NM66 108 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 FCN1O00602 326 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 CA2P00918 260 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 NQO2P16083 231 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 VDAC1P21796 283 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 CD40LGP29965 261 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 BRWD1-AS2P59051 145 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 TAS2R31P59538 309 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 SHISA2Q6UWI4 295 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 VKORC1L1Q8N0U8 176 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 RHOVQ96L33 236 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 NOL4LQ96MY1 436 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-219ENST00000488186 C7orf50Q9BRJ6 194 aaKnown RBP12.44□□□□□ -0.42
C9orf3-219ENST00000488186 PLEKHA2Q9HB19 425 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 GPR132Q9UNW8 380 aa12.44□□□□□ -0.42
C9orf3-219ENST00000488186 IGHV7-81A0A0B4J1V7 117 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 C3orf85A0A1B0GTC6 90 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 PSMB11A5LHX3 300 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 OR2A4O95047 310 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 S1PR2O95136 353 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 SAA1P0DJI8 122 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-219ENST00000488186 CX3CL1P78423 397 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 TMEM267Q0VDI3 215 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-219ENST00000488186 FXYD3Q14802 87 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 STPG2Q8N412 459 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 OR5AU1Q8NGC0 362 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 WFDC12Q8WWY7 111 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 OR2A7Q96R45 310 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 SLC25A21Q9BQT8 299 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-219ENST00000488186 FAM212BQ9NTI7 297 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-219ENST00000488186 COMMD9Q9P000 198 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 KCNIP3Q9Y2W7 256 aa12.43□□□□□ -0.42
C9orf3-219ENST00000488186 B3GALNT1O75752 331 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 CRYGBP07316 175 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 RPA2P15927 270 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 AKR1C4P17516 323 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 TNXAQ16473 311 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 TRIM16LQ309B1 348 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 SGPP2Q8IWX5 399 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 MMD2Q8IY49 270 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 C11orf44Q8N8P7 122 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 OR4X2Q8NGF9 303 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 GRPEL2Q8TAA5 225 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 MRGPRFQ96AM1 343 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 R3HDM4Q96D70 268 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 PHB2Q99623 299 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 RTBDNQ9BSG5 229 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-219ENST00000488186 WNT10AQ9GZT5 417 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 C5orf66Q9H5L9 145 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 TPSG1Q9NRR2 321 aa12.42□□□□□ -0.42
C9orf3-219ENST00000488186 H0Y980 276 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 ATP6V0E1O15342 81 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 FBXO24O75426 580 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 ATG12O94817 140 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 KRASP01116 189 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 IGF1P05019 195 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 CCR6P51684 374 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 PJVKQ0ZLH3 352 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 RBMS2Q15434 407 aaKnown RBP12.41□□□□□ -0.42
C9orf3-219ENST00000488186 PRSS8Q16651 343 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 TMED4Q7Z7H5 227 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 ZNF329Q86UD4 541 aa12.41□□□□□ -0.42
C9orf3-219ENST00000488186 OR4A5Q8NH83 315 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms