RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 OR4A47Q6IF82 309 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 C1orf122Q6ZSJ8 110 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 SSX9Q7RTT3 188 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 OR4P4Q8NGL7 312 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 OR13D1Q8NGV5 346 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 RHOVQ96L33 236 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 PCGF1Q9BSM1 259 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 SLC25A31Q9H0C2 315 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 RBKSQ9H477 322 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 WFDC1Q9HC57 220 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 ITGB1BP2Q9UKP3 347 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 CENPEQ02224 2701 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 FBN2P35556 2912 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 ASH1LQ9NR48 2969 aaKnown RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 VWC2LB2RUY7 222 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 BUB1B-PAK6H3BSN5 160 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 ENSAO43768 121 aaKnown RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 MED6O75586 246 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 HRASP01112 189 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 APOA2P02652 100 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 NMBP08949 121 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 RRASP10301 218 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 IAPPP10997 89 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 ARF6P62330 175 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 PRB3Q04118 309 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 TMEM177Q53S58 311 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 HCP5Q6MZN7 132 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 ZNF429Q86V71 674 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 PDPNQ86YL7 162 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 TGIF2LXQ8IUE1 241 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 UBAC2Q8NBM4 344 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 OR11H6Q8NGC7 330 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 OSR1Q8TAX0 266 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 C10orf105Q8TEF2 133 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 MARVELD3Q96A59 401 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 RBMXL1Q96E39 390 aaKnown RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 QTRT1Q9BXR0 403 aaKnown RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 SMIM3Q9BZL3 60 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 ARV1Q9H2C2 271 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 UNKLQ9H9P5 680 aaKnown RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 BARX1Q9HBU1 254 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 TRAV3A0A0B4J244 114 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 C15orf61A6NNL5 157 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 H3BP45 60 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 LY6LH3BQJ8 138 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 NDUFS8O00217 210 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 JTBO76095 146 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 PRTN3P24158 256 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 COX7A1P24310 79 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 OR2B8PP59922 312 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 STPG2Q8N412 459 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 PNKDQ8N490 385 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 OR52E5Q8NH55 327 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 PCNPQ8WW12 178 aaKnown RBP7.65□□□□□ -1.18
SF3B1-211ENST00000487698 FAM168AQ92567 244 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 PSENENQ9NZ42 101 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 KPTNQ9Y664 436 aa7.65□□□□□ -1.18
SF3B1-211ENST00000487698 IGHV2-70DA0A0C4DH43 119 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 LINC00862A6NCI5 91 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 SRRM4A7MD48 611 aaKnown RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 ODF3BA8MYP8 253 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 CST7O76096 145 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 PLA2G2AP14555 144 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 SULT1A1P50225 295 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 ATP5J2P56134 94 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 FAM74A1Q5RGS3 127 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 TMEM14EPQ6UXP3 125 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 OR4A16Q8NH70 328 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 DTD1Q8TEA8 209 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 NRGNQ92686 78 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 ZDHHC16Q969W1 377 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 PIMREGQ9BSJ6 248 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 SIRPDQ9H106 197 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 SLC25A32Q9H2D1 315 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 SIRT7Q9NRC8 400 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 TMEM14BQ9NUH8 114 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 FOXA2Q9Y261 457 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 POLR3KQ9Y2Y1 108 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 WASHC3Q9Y3C0 194 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 AMMECR1Q9Y4X0 333 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 AUP1Q9Y679 476 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 RBMXL2O75526 392 aaKnown RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 SAA1P0DJI8 122 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 MC5RP33032 325 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 RAB13P51153 203 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 SPCS3P61009 180 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 RAB14P61106 215 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 LCN2P80188 198 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 TMEM267Q0VDI3 215 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 LDLRAD2Q5SZI1 272 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 HAPLN4Q86UW8 402 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 STX12Q86Y82 276 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 OR4C13Q8NGP0 309 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 OR5C1Q8NGR4 320 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 CIB3Q96Q77 187 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 AIFM2Q9BRQ8 373 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 BET1LQ9NYM9 111 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 CACFD1Q9UGQ2 172 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms