RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 HLA-DQB1P01920 261 aa18.07■□□□□ 0.48
PLOD3-215ENST00000487563 SDC2P34741 201 aa18.07■□□□□ 0.48
PLOD3-215ENST00000487563 SYNJ2BPP57105 145 aa18.07■□□□□ 0.48
PLOD3-215ENST00000487563 DYRK1AQ13627 763 aa18.07■□□□□ 0.48
PLOD3-215ENST00000487563 ZNF343Q6P1L6 599 aa18.07■□□□□ 0.48
PLOD3-215ENST00000487563 ADAD2Q8NCV1 583 aaKnown RBP18.07■□□□□ 0.48
PLOD3-215ENST00000487563 OR9G4Q8NGQ1 327 aa18.07■□□□□ 0.48
PLOD3-215ENST00000487563 ZNF430Q9H8G1 570 aaPredicted RBP18.07■□□□□ 0.48
PLOD3-215ENST00000487563 LOC100506127A0A0U1RQW1 187 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 KLF5Q13887 457 aaPredicted RBP18.06■□□□□ 0.48
PLOD3-215ENST00000487563 TATDN3Q17R31 274 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 RPEL1Q2QD12 228 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 MMD2Q8IY49 270 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 TCTEX1D2Q8WW35 142 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 RCHY1Q96PM5 261 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 SPIN2AQ99865 258 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 SPIN2BQ9BPZ2 258 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 ANXA10Q9UJ72 324 aa18.06■□□□□ 0.48
PLOD3-215ENST00000487563 IGKV1D-13A0A0B4J2D9 117 aa18.05■□□□□ 0.48
PLOD3-215ENST00000487563 SSX5O60225 188 aa18.05■□□□□ 0.48
PLOD3-215ENST00000487563 IGKV1-13P0DP09 117 aa18.05■□□□□ 0.48
PLOD3-215ENST00000487563 ARPC4P59998 168 aa18.05■□□□□ 0.48
PLOD3-215ENST00000487563 OR4S2Q8NH73 311 aa18.05■□□□□ 0.48
PLOD3-215ENST00000487563 HSD17B10Q99714 261 aaKnown RBP18.05■□□□□ 0.48
PLOD3-215ENST00000487563 ZMAT4Q9H898 229 aa18.05■□□□□ 0.48
PLOD3-215ENST00000487563 ETV7Q9Y603 341 aa18.05■□□□□ 0.48
PLOD3-215ENST00000487563 FAM223BA6NKX1 122 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 TRBV12-3P01733 135 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 CLEC2LP0C7M8 214 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 RPL30P62888 115 aaKnown RBP18.04■□□□□ 0.48
PLOD3-215ENST00000487563 RHOGP84095 191 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 IDNKQ5T6J7 187 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 FAM223AQ8IWN6 122 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 SGPP2Q8IWX5 399 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 SNAPC3Q92966 411 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 SPATA2Q9UM82 520 aa18.04■□□□□ 0.48
PLOD3-215ENST00000487563 TRAV18A0A075B6X5 111 aa18.03■□□□□ 0.48
PLOD3-215ENST00000487563 PRH1P02810 166 aa18.03■□□□□ 0.48
PLOD3-215ENST00000487563 SCAND1P57086 179 aa18.03■□□□□ 0.48
PLOD3-215ENST00000487563 EXOSC2Q13868 293 aaKnown RBP18.03■□□□□ 0.48
PLOD3-215ENST00000487563 NEDD8Q15843 81 aa18.03■□□□□ 0.48
PLOD3-215ENST00000487563 C10orf55Q5SWW7 151 aa18.03■□□□□ 0.48
PLOD3-215ENST00000487563 RNF167Q9H6Y7 350 aa18.03■□□□□ 0.48
PLOD3-215ENST00000487563 AKIP1Q9NQ31 210 aa18.03■□□□□ 0.48
PLOD3-215ENST00000487563 TAS2R8Q9NYW2 309 aa18.03■□□□□ 0.48
PLOD3-215ENST00000487563 STAB2Q8WWQ8 2551 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 H0Y980 276 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 ATP5G2Q06055 141 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 SLC25A42Q86VD7 318 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 VKORC1L1Q8N0U8 176 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 BEST4Q8NFU0 473 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 OR5H6Q8NGV6 325 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 VSTM2AQ8TAG5 236 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 ADAM30Q9UKF2 790 aa18.02■□□□□ 0.48
PLOD3-215ENST00000487563 HUWE1Q7Z6Z7 4374 aaKnown RBP18.02■□□□□ 0.47
PLOD3-215ENST00000487563 TNCP24821 2201 aa18.01■□□□□ 0.47
PLOD3-215ENST00000487563 C3orf84H3BNL1 204 aa18.01■□□□□ 0.47
PLOD3-215ENST00000487563 RBMXL2O75526 392 aaKnown RBP18.01■□□□□ 0.47
PLOD3-215ENST00000487563 IGLV2-14P01704 120 aa18.01■□□□□ 0.47
PLOD3-215ENST00000487563 IGHV4-30-4P0DP06 118 aa18.01■□□□□ 0.47
PLOD3-215ENST00000487563 SLC25A38Q96DW6 304 aa18.01■□□□□ 0.47
PLOD3-215ENST00000487563 DPPA5A6NC42 116 aa18■□□□□ 0.47
PLOD3-215ENST00000487563 OR2A4O95047 310 aa18■□□□□ 0.47
PLOD3-215ENST00000487563 LCN12Q6JVE5 192 aa18■□□□□ 0.47
PLOD3-215ENST00000487563 ZNF66Q6ZN08 573 aa18■□□□□ 0.47
PLOD3-215ENST00000487563 SECTM1Q8WVN6 248 aa18■□□□□ 0.47
PLOD3-215ENST00000487563 OR2A7Q96R45 310 aa18■□□□□ 0.47
PLOD3-215ENST00000487563 PEMTQ9UBM1 199 aa18■□□□□ 0.47
PLOD3-215ENST00000487563 A0A0A6YYH2 397 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 A6NJ64 397 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 KBTBD11O94819 623 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 FCGR2CP31995 323 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 KIR2DS2P43631 304 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 RPL27AP46776 148 aaKnown RBP17.99■□□□□ 0.47
PLOD3-215ENST00000487563 ZNF45Q02386 682 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 IL34Q6ZMJ4 242 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 Q8N1Y9 231 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 MFSD4AQ8N468 514 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 TTC9CQ8N5M4 171 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 GVQW1Q8N7I0 195 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 NECAP1Q8NC96 275 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 OR13F1Q8NGS4 319 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 FYTTD1Q96QD9 318 aaKnown RBP17.99■□□□□ 0.47
PLOD3-215ENST00000487563 DIABLOQ9NR28 239 aa17.99■□□□□ 0.47
PLOD3-215ENST00000487563 HMX3A6NHT5 357 aa17.98■□□□□ 0.47
PLOD3-215ENST00000487563 OR2J3O76001 311 aa17.98■□□□□ 0.47
PLOD3-215ENST00000487563 HRASP01112 189 aa17.98■□□□□ 0.47
PLOD3-215ENST00000487563 CSN3P07498 182 aa17.98■□□□□ 0.47
PLOD3-215ENST00000487563 GTSCR1Q86UQ5 136 aa17.98■□□□□ 0.47
PLOD3-215ENST00000487563 Q8N402 240 aa17.98■□□□□ 0.47
PLOD3-215ENST00000487563 TMEM167AQ8TBQ9 72 aa17.98■□□□□ 0.47
PLOD3-215ENST00000487563 ZNF257Q9Y2Q1 563 aa17.98■□□□□ 0.47
PLOD3-215ENST00000487563 TRBV9A0A0B4J1U6 114 aa17.97■□□□□ 0.47
PLOD3-215ENST00000487563 BMPR1BO00238 502 aa17.97■□□□□ 0.47
PLOD3-215ENST00000487563 TNFSF12O43508 249 aa17.97■□□□□ 0.47
PLOD3-215ENST00000487563 FCER2P06734 321 aa17.97■□□□□ 0.47
PLOD3-215ENST00000487563 MAS1LP35410 378 aa17.97■□□□□ 0.47
PLOD3-215ENST00000487563 EIF4EBP1Q13541 118 aaPredicted RBP17.97■□□□□ 0.47
PLOD3-215ENST00000487563 KCTD21Q4G0X4 260 aa17.97■□□□□ 0.47
PLOD3-215ENST00000487563 SSX9Q7RTT3 188 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms