RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TECRQ9NZ01 308 aaKnown RBP14.59□□□□□ -0.07
SMPDL3A-202ENST00000487215 SELENOKQ9Y6D0 94 aa14.59□□□□□ -0.07
SMPDL3A-202ENST00000487215 V9GY05 133 aa14.59□□□□□ -0.07
SMPDL3A-202ENST00000487215 TRBV6-7A0A0A0MS04 114 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 DENRO43583 198 aaKnown RBP14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 OR2J3O76001 311 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 GSTT2P0CG29 244 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 GSTT2BP0CG30 244 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 CALRP27797 417 aaKnown RBP14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 AQP4P55087 323 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 RPS25P62851 125 aaKnown RBP14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 PMS2P11Q13670 270 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 C15orf32Q32M92 178 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 C2orf76Q3KRA6 126 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 C10orf55Q5SWW7 151 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 SLC16A13Q7RTY0 426 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 PRSS48Q7RTY5 328 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 OR10J5Q8NHC4 309 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 CACNG8Q8WXS5 425 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 CENPOQ9BU64 300 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 ST6GALNAC5Q9BVH7 336 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 VCX3BQ9H321 246 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 ZNF430Q9H8G1 570 aaPredicted RBP14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 RAB22AQ9UL26 194 aa14.58□□□□□ -0.08
SMPDL3A-202ENST00000487215 CXorf65A6NEN9 183 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 LINC00473A8K010 186 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 LGALS9O00182 355 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 PDCD5O14737 125 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 GGCTO75223 188 aaKnown RBP14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 OR2C1O95371 312 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 DUTP33316 252 aaKnown RBP14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 CLDN12P56749 244 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 TTC9CQ8N5M4 171 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 ADTRPQ96IZ2 230 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 MGLLQ99685 303 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 SPIN2AQ99865 258 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 SPIN2BQ9BPZ2 258 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 GGTLC1Q9BX51 225 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 KCNK7Q9Y2U2 307 aa14.57□□□□□ -0.08
SMPDL3A-202ENST00000487215 DIRAS3O95661 229 aa14.56□□□□□ -0.08
SMPDL3A-202ENST00000487215 FCGR3AP08637 254 aa14.56□□□□□ -0.08
SMPDL3A-202ENST00000487215 SAA1P0DJI8 122 aaPredicted RBP14.56□□□□□ -0.08
SMPDL3A-202ENST00000487215 FAM209BQ5JX69 171 aa14.56□□□□□ -0.08
SMPDL3A-202ENST00000487215 TMEM61Q8N0U2 210 aa14.56□□□□□ -0.08
SMPDL3A-202ENST00000487215 OSR1Q8TAX0 266 aaPredicted RBP14.56□□□□□ -0.08
SMPDL3A-202ENST00000487215 RBM7Q9Y580 266 aaKnown RBP14.56□□□□□ -0.08
SMPDL3A-202ENST00000487215 CREBL2O60519 120 aaPredicted RBP14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 ACTL6BO94805 426 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 CBLN1P23435 193 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 CRHBPP24387 322 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 GADD45AP24522 165 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 FABP5Q01469 135 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 PLA2G7Q13093 441 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 CDK10Q15131 360 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 C19orf35Q6ZS72 473 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 MAFIPQ8WZ33 124 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 RAB3CQ96E17 227 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 BLOC1S6Q9UL45 172 aa14.55□□□□□ -0.08
SMPDL3A-202ENST00000487215 LOC102724200A0A096LPH7 203 aaPredicted RBP14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 NUPR2A6NF83 97 aa14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 HSPA13P48723 471 aa14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 EWSR1Q01844 656 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 ZNF57Q68EA5 555 aaPredicted RBP14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 GPHB5Q86YW7 130 aa14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 MMD2Q8IY49 270 aa14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 OR52B4Q8NGK2 314 aa14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 GINS4Q9BRT9 223 aa14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 MLXQ9UH92 298 aa14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 ZNF257Q9Y2Q1 563 aa14.54□□□□□ -0.08
SMPDL3A-202ENST00000487215 TRAV1-2A0A0B4J238 106 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 TMEM272A0A1B0GTI8 110 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 TMEM213A2RRL7 107 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 HMX3A6NHT5 357 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 ANKRD65E5RJM6 399 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 IGHV3-23P01764 117 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 SLC25A42Q86VD7 318 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 NRG4Q8WWG1 115 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 CCDC140Q96MF4 163 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 FBXL7Q9UJT9 491 aa14.53□□□□□ -0.08
SMPDL3A-202ENST00000487215 A0A0J9YWU9 116 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 METTL21EPA6NDL7 271 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 TEX22C9J3V5 150 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 SCAF4O95104 1147 aaKnown RBP14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 RAB6AP20340 208 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 MYL9P24844 172 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 ARL3P36405 182 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 ARL6IP1Q15041 203 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 TBCEQ15813 527 aaPredicted RBP14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 HES5Q5TA89 166 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 ZNF367Q7RTV3 350 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 H1FOOQ8IZA3 346 aaPredicted RBP14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 OR10R2Q8NGX6 335 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 DCUN1D5Q9BTE7 237 aa14.52□□□□□ -0.09
SMPDL3A-202ENST00000487215 DNAH10Q8IVF4 4471 aa14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 A8MWP6 167 aa14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 NDUFB8O95169 186 aa14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 TALDO1P37837 337 aa14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 MAP2K4P45985 399 aa14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 CEMP1Q6PRD7 247 aaPredicted RBP14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 CLEC19AQ6UXS0 136 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms