RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 LINC01619G3V211 115 aa14.17□□□□□ -0.14
CLDN11-206ENST00000486429 EIF4EBP1Q13541 118 aaPredicted RBP14.17□□□□□ -0.14
CLDN11-206ENST00000486429 MSMO1Q15800 293 aa14.17□□□□□ -0.14
CLDN11-206ENST00000486429 ZNF66Q6ZN08 573 aa14.17□□□□□ -0.14
CLDN11-206ENST00000486429 OR5T1Q8NG75 326 aa14.17□□□□□ -0.14
CLDN11-206ENST00000486429 SRSF12Q8WXF0 261 aaKnown RBP14.17□□□□□ -0.14
CLDN11-206ENST00000486429 CCL28Q9NRJ3 127 aa14.17□□□□□ -0.14
CLDN11-206ENST00000486429 IGHV4OR15-8A0A075B7B6 117 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 A0A087WW49 117 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 OVOL1O14753 267 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 ACTL6BO94805 426 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 EIF4EP06730 217 aaKnown RBP14.16□□□□□ -0.14
CLDN11-206ENST00000486429 SLURP1P55000 103 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 FXYD4P59646 89 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 MRGPRG-AS1Q2M3A8 158 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 MMD2Q8IY49 270 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 DCUN1D4Q92564 292 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 SLC5A7Q9GZV3 580 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 ZNF430Q9H8G1 570 aaPredicted RBP14.16□□□□□ -0.14
CLDN11-206ENST00000486429 COMMD3Q9UBI1 195 aa14.16□□□□□ -0.14
CLDN11-206ENST00000486429 MPPED1O15442 326 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 TNFSF12O43508 249 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 RAMP3O60896 148 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 APOA1P02647 267 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 APELAP0DMC3 54 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 KIR2DS2P43631 304 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 HERV-K104P61576 105 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 DCTN2Q13561 401 aaKnown RBP14.15□□□□□ -0.14
CLDN11-206ENST00000486429 MFSD4AQ8N468 514 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 ZBTB34Q8NCN2 500 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 VSTM2AQ8TAG5 236 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 RHOVQ96L33 236 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 COA4Q9NYJ1 87 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 EHFQ9NZC4 300 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 ANAPC10Q9UM13 185 aa14.15□□□□□ -0.14
CLDN11-206ENST00000486429 A0A0G2JLM5 398 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 C13orf42A0A1B0GVH6 325 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 GABARAPO95166 117 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 HSPB1P04792 205 aaKnown RBP14.14□□□□□ -0.15
CLDN11-206ENST00000486429 PRSS3P35030 304 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 TAS2R46P59540 309 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 CATR1Q13166 79 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 DEFB121Q5J5C9 76 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 TMEM17Q86X19 198 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 VKORC1L1Q8N0U8 176 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 GIMAP1Q8WWP7 306 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 CMTM3Q96MX0 182 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 GPHA2Q96T91 129 aa14.14□□□□□ -0.15
CLDN11-206ENST00000486429 MSGN1A6NI15 193 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 KBTBD11O94819 623 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 OR2A4O95047 310 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 BRI3O95415 125 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 OR9G9P0C7N8 305 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 ECI1P42126 302 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 INSL3P51460 131 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 C10orf55Q5SWW7 151 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 ANKRD13BQ86YJ7 626 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 OR5H2Q8NGV7 314 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 DLX4Q92988 240 aaPredicted RBP14.13□□□□□ -0.15
CLDN11-206ENST00000486429 BORCS5Q969J3 196 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 OR2A7Q96R45 310 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 SPIN2AQ99865 258 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 SPIN2BQ9BPZ2 258 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 MRPS26Q9BYN8 205 aaKnown RBP14.13□□□□□ -0.15
CLDN11-206ENST00000486429 TINAGL1Q9GZM7 467 aaPredicted RBP14.13□□□□□ -0.15
CLDN11-206ENST00000486429 NAA50Q9GZZ1 169 aaKnown RBP14.13□□□□□ -0.15
CLDN11-206ENST00000486429 SCOCQ9UIL1 159 aa14.13□□□□□ -0.15
CLDN11-206ENST00000486429 SMIM31A0A1B0GVY4 71 aa14.12□□□□□ -0.15
CLDN11-206ENST00000486429 HRASP01112 189 aa14.12□□□□□ -0.15
CLDN11-206ENST00000486429 RORCP51449 518 aa14.12□□□□□ -0.15
CLDN11-206ENST00000486429 BRWD1-AS2P59051 145 aa14.12□□□□□ -0.15
CLDN11-206ENST00000486429 DEFA5Q01523 94 aa14.12□□□□□ -0.15
CLDN11-206ENST00000486429 SPAG16Q8N0X2 631 aa14.12□□□□□ -0.15
CLDN11-206ENST00000486429 ADAD2Q8NCV1 583 aaKnown RBP14.12□□□□□ -0.15
CLDN11-206ENST00000486429 TMEM167AQ8TBQ9 72 aa14.12□□□□□ -0.15
CLDN11-206ENST00000486429 AP3S1Q92572 193 aa14.12□□□□□ -0.15
CLDN11-206ENST00000486429 RBFOX2O43251 390 aaKnown RBP eCLIP14.11□□□□□ -0.15
CLDN11-206ENST00000486429 SAP30O75446 220 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 PMP2P02689 132 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 NAT1P18440 290 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 DYRK1AQ13627 763 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 CTF1Q16619 201 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 GPR107Q5VW38 600 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 ZNF818PQ6ZRF7 136 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 ZNF429Q86V71 674 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 PUSL1Q8N0Z8 303 aaKnown RBP14.11□□□□□ -0.15
CLDN11-206ENST00000486429 MOB3AQ96BX8 217 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 PRR25Q96S07 402 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 SCPEP1Q9HB40 452 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 RANGRFQ9HD47 186 aaPredicted RBP14.11□□□□□ -0.15
CLDN11-206ENST00000486429 TNCP24821 2201 aa14.11□□□□□ -0.15
CLDN11-206ENST00000486429 SULT1C2O00338 296 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 HPGDSO60760 199 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 ELK1P19419 428 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 ZP3P21754 424 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 RFX2P48378 723 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 AADACL3Q5VUY0 350 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 MZT2AQ6P582 158 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 SSX9Q7RTT3 188 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 SNX29P2Q8IUI4 249 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms