RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 WSB1Q9Y6I7 421 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 A0A1W2PRX2 142 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 TCRBV4S1A1TA0A5B7 111 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 M0QZ24 198 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 CRYGBP07316 175 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 ZNF735P0CB33 412 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 PI3P19957 117 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 UCP3P55916 312 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 UBE2KP61086 200 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 NSUN5P1Q3KNT7 163 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 PPP1R27Q86WC6 154 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 TOMM5Q8N4H5 51 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 TERB2Q8NHR7 220 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 GRPEL2Q8TAA5 225 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 MARCH1Q8TCQ1 289 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 ARPC1AQ92747 370 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 FAM103A1Q9BTL3 118 aaKnown RBP9.32□□□□□ -0.92
HPS4-214ENST00000485842 SRRQ9GZT4 340 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 SLC2A9Q9NRM0 540 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 FBXO7Q9Y3I1 522 aa9.32□□□□□ -0.92
HPS4-214ENST00000485842 ANK2Q01484 3957 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 TRAV41A0A0B4J266 112 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 G3V318 75 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 RBFOX2O43251 390 aaKnown RBP eCLIP9.31□□□□□ -0.92
HPS4-214ENST00000485842 S1PR2O95136 353 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 CNIH1O95406 144 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 HRASP01112 189 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 IGF1P05019 195 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 RPA2P15927 270 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 INPP1P49441 399 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 AP3S2P59780 193 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 FXYD3Q14802 87 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 TNXAQ16473 311 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 C2orf68Q2NKX9 166 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 TCTEX1D4Q5JR98 221 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 TRIQKQ629K1 86 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 ZNF57Q68EA5 555 aaPredicted RBP9.31□□□□□ -0.92
HPS4-214ENST00000485842 TBC1D26Q86UD7 250 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 TEX45Q8NA69 505 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 OR51S1Q8NGJ8 323 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 OR13C8Q8NGS7 320 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 RHOVQ96L33 236 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 PRRT1Q99946 306 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 GON7Q9BXV9 100 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
HPS4-214ENST00000485842 ARPC1BO15143 372 aaKnown RBP9.3□□□□□ -0.92
HPS4-214ENST00000485842 HPRT1P00492 218 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 OPN1MWP04001 364 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 OPN1MW2P0DN77 364 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 OPN1MW3P0DN78 364 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 F2RP25116 425 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 FAUP35544 74 aaKnown RBP9.3□□□□□ -0.92
HPS4-214ENST00000485842 LPAR6P43657 344 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 PIGPP57054 158 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 CD83Q01151 205 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 KLF9Q13886 244 aaPredicted RBP9.3□□□□□ -0.92
HPS4-214ENST00000485842 PRSS8Q16651 343 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 UNQ5815/PRO19632Q6UWF5 114 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 ZNF562Q6V9R5 426 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 VSTM2AQ8TAG5 236 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 ZFAND1Q8TCF1 268 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 CD300LFQ8TDQ1 290 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 MRGPRFQ96AM1 343 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 ZNF486Q96H40 463 aaPredicted RBP9.3□□□□□ -0.92
HPS4-214ENST00000485842 ZNF430Q9H8G1 570 aaPredicted RBP9.3□□□□□ -0.92
HPS4-214ENST00000485842 COPZ2Q9P299 210 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 SCP2D1Q9UJQ7 156 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 ZNF580Q9UK33 172 aa9.3□□□□□ -0.92
HPS4-214ENST00000485842 A0A1W2PN81 502 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 CREBL2O60519 120 aaPredicted RBP9.29□□□□□ -0.92
HPS4-214ENST00000485842 ACTL6BO94805 426 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 KBTBD11O94819 623 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 OR2A4O95047 310 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 TSPAN15O95858 294 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 CTSDP07339 412 aaPredicted RBP9.29□□□□□ -0.92
HPS4-214ENST00000485842 NQO2P16083 231 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 CHRNA7P36544 502 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 TAS2R31P59538 309 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 ERVK-16P61578 105 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 RND3P61587 244 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 SSBP2P81877 361 aaPredicted RBP9.29□□□□□ -0.92
HPS4-214ENST00000485842 CFHR3Q02985 330 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 BAK1Q16611 211 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 MRGPRG-AS1Q2M3A8 158 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 CXorf66Q5JRM2 361 aaPredicted RBP9.29□□□□□ -0.92
HPS4-214ENST00000485842 OR4A47Q6IF82 309 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 TEX38Q6PEX7 206 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 MMD2Q8IY49 270 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
HPS4-214ENST00000485842 COMMD1Q8N668 190 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 TCTEX1D1Q8N7M0 179 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 GDPD1Q8N9F7 314 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 LFNGQ8NES3 379 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 DMBX1Q8NFW5 382 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 R3HDM4Q96D70 268 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 OR2A7Q96R45 310 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms