RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ZNF221Q9UK13 617 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 RBMX2Q9Y388 322 aaKnown RBP4.45□□□□□ -1.7
CUX1-208ENST00000485792 TENM3Q9P273 2699 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 RYR2Q92736 4967 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 MEIS3P1A6NDR6 274 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 CGB1A6NKQ9 187 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 NCBP2LA6PVI3 153 aaKnown RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 G3V318 75 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 G3V4G9 280 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 ATP6V0E1O15342 81 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 RBFOX2O43251 390 aaKnown RBP eCLIP4.44□□□□□ -1.7
CUX1-208ENST00000485792 PRB2P02812 416 aaPredicted RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 OR5H8P0DN80 308 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 MYOD1P15172 320 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 NFYAP23511 347 aaPredicted RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 GNRHRP30968 328 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 TALDO1P37837 337 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 THBS3P49746 956 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 LINC00310P59036 64 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 GNG2P59768 71 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 UBE2KP61086 200 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 MRPS15P82914 257 aaKnown RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 PJVKQ0ZLH3 352 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 ZNF66Q6ZN08 573 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 PPP1R27Q86WC6 154 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 PUSL1Q8N0Z8 303 aaKnown RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 TCTEX1D1Q8N7M0 179 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 LINC00482Q8N8I6 264 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 ZNF491Q8N8L2 437 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 TEX45Q8NA69 505 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 OR4F17Q8NGA8 305 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 OSR1Q8TAX0 266 aaPredicted RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 CASTOR1Q8WTX7 329 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 RAB2BQ8WUD1 216 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 FLYWCH2Q96CP2 140 aaKnown RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 UBE2E2Q96LR5 201 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 DUX3Q96PT4 197 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 OR4F4Q96R69 305 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 ABHD1Q96SE0 405 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 TSNAXQ99598 290 aaKnown RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 HSD17B10Q99714 261 aaKnown RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 ST6GALNAC5Q9BVH7 336 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 GON7Q9BXV9 100 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 SLIRPQ9GZT3 109 aaKnown RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 FXYD6Q9H0Q3 95 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 FBXL15Q9H469 300 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 FAM212BQ9NTI7 297 aaPredicted RBP4.44□□□□□ -1.7
CUX1-208ENST00000485792 CEPT1Q9Y6K0 416 aa4.44□□□□□ -1.7
CUX1-208ENST00000485792 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
CUX1-208ENST00000485792 TRBV9A0A0B4J1U6 114 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 TCRBV4S1A1TA0A5B7 111 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 E7EUB6 86 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 NPIPB6E9PJ23 425 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 H3BMQ9 156 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 ZNF701M0R085 212 aaPredicted RBP4.43□□□□□ -1.7
CUX1-208ENST00000485792 M0R1X1 148 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 CTDSPLO15194 276 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 HPGDSO60760 199 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 PEX14O75381 377 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 PPYP01298 95 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 CD74P04233 296 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 PI3P19957 117 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 AADACP22760 399 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 PRSS3P35030 304 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 RAB9AP51151 201 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 UCP3P55916 312 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 SLC35B1P78383 322 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 EGFEM1PQ0D2K5 195 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 CDK10Q15131 360 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 DEFB136Q30KP8 78 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 VAX1Q5SQQ9 334 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 TMEM69Q5SWH9 247 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 C10orf55Q5SWW7 151 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 AADACL3Q5VUY0 350 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 GPR141Q7Z602 305 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 LHFPL1Q86WI0 220 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 OR4X2Q8NGF9 303 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 MOB3AQ96BX8 217 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 RAX2Q96IS3 184 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 TMEM68Q96MH6 324 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 GINS4Q9BRT9 223 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 KLK15Q9H2R5 256 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 SLC35D1Q9NTN3 355 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 NECAP2Q9NVZ3 263 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 CCDC59Q9P031 241 aaKnown RBP4.43□□□□□ -1.7
CUX1-208ENST00000485792 COMMD3Q9UBI1 195 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 MTFP1Q9UDX5 166 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 CSMD3Q7Z407 3707 aa4.43□□□□□ -1.7
CUX1-208ENST00000485792 TRAV41A0A0B4J266 112 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 A0A1W2PRX2 142 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 H3BUA1 57 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 CTDSP2O14595 271 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 SLC25A17O43808 307 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 APOA2P02652 100 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 PLA2G1BP04054 148 aaKnown RBP4.42□□□□□ -1.7
CUX1-208ENST00000485792 EDN2P20800 178 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 PTBP1P26599 531 aaKnown RBP eCLIP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms