RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 ZNF718Q3SXZ3 478 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 FBXW9Q5XUX1 488 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 YRDCQ86U90 279 aaKnown RBP3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 Q8N976 141 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 ZNF114Q8NC26 417 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 OR10G8Q8NGN5 311 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 OR2Y1Q8NGV0 311 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 OR52E5Q8NH55 327 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 OR1L1Q8NH94 360 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 SGMS2Q8NHU3 365 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 RDH5Q92781 318 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 POM121L2Q96KW2 1035 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 RNF2Q99496 336 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 VAMP8Q9BV40 100 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 RTL8AQ9BWD3 113 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 SFXN3Q9BWM7 321 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 ZDHHC11Q9H8X9 412 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 CLN8Q9UBY8 286 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 PPP1R3CQ9UQK1 317 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 ZFP30Q9Y2G7 519 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 POLDIP2Q9Y2S7 368 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 PCDH15Q96QU1 1955 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 SHANK1Q9Y566 2161 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 F5P12259 2224 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 NCOA6Q14686 2063 aaPredicted RBP3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 ATG2BQ96BY7 2078 aa3.9□□□□□ -1.79
SMARCC1-206ENST00000485737 TRGV10A0A0A0MS01 117 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 A0A1B0GUS0 222 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 C5orf49A4QMS7 147 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 A6NNC1 897 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 ZNF891A8MT65 544 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 PRSS46E5RG02 174 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 HMGB3O15347 200 aaKnown RBP3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 ZG16O60844 167 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 RAMP3O60896 148 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 WDR1O75083 606 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 MRPL33O75394 65 aaKnown RBP3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 S1PR2O95136 353 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 NXPH2O95156 264 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 NDUFB4O95168 129 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 OR2H2O95918 312 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 CXorf1O96002 111 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 CRYAAP02489 173 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 P04436 131 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 TDGF1P13385 188 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 CRISP2P16562 243 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 KITLGP21583 273 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 CBLN1P23435 193 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 CDKN1AP38936 164 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 WNT5AP41221 380 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 CLDN18P56856 261 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 BRWD1-AS2P59051 145 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 RPL30P62888 115 aaKnown RBP3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 PMP22Q01453 160 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 IGFBP7Q16270 282 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 GABRA6Q16445 453 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 CLEC12BQ2HXU8 276 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 OR10J3Q5JRS4 329 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 WDR73Q6P4I2 378 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 GUSBP11Q6P575 273 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 FAM180AQ6UWF9 173 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 ZNF705AQ6ZN79 300 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 TCF23Q7RTU1 214 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 TIPARPQ7Z3E1 657 aaKnown RBP3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 C1orf174Q8IYL3 243 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 OR5AU1Q8NGC0 362 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 ABHD3Q8WU67 409 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 ORAOV1Q8WV07 137 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 IL1F10Q8WWZ1 152 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 MBD6Q96DN6 1003 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 KCNS1Q96KK3 526 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 ZNF488Q96MN9 340 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 WFIKKN1Q96NZ8 548 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 HSPB9Q9BQS6 159 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 DERL1Q9BUN8 251 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 GNB1LQ9BYB4 327 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 OPN3Q9H1Y3 402 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 HES4Q9HCC6 221 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 MSL2Q9HCI7 577 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 ZNF586Q9NXT0 402 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 UQCR10Q9UDW1 63 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 IL17BQ9UHF5 180 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 SLC45A2Q9UMX9 530 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 A0A0C4DFX4 3053 aa3.89□□□□□ -1.79
SMARCC1-206ENST00000485737 TDRD6O60522 2096 aaKnown RBP3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 TRGV8A0A0C4DH27 118 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 C20orf202A1L168 122 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 GRIFINA4D1Z8 144 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 FAM90A27PA6NNH2 459 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 FAM166BA8MTA8 275 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 C17orf98A8MV24 154 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 C12orf77C9JDV5 145 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 FNDC10F2Z333 226 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 K7EN84 100 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 SIRPB1O00241 398 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 RHBDL1O75783 438 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 NEURL1O76050 574 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 TOMM40O96008 361 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 OR5G3P0C626 314 aa3.88□□□□□ -1.79
SMARCC1-206ENST00000485737 ARL14EPLP0DKL9 152 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms