RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 TINAGL1Q9GZM7 467 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-215ENST00000485550 VCX3BQ9H321 246 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 PEF1Q9UBV8 284 aaKnown RBP8.07□□□□□ -1.12
HMGN1-215ENST00000485550 ALMS1Q8TCU4 4167 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 TRDV1A0A1B0GX56 115 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 RAB6AP20340 208 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 NFYAP23511 347 aaPredicted RBP8.06□□□□□ -1.12
HMGN1-215ENST00000485550 DYRK1AQ13627 763 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 PRSS8Q16651 343 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 VMA21Q3ZAQ7 101 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 OR2B11Q5JQS5 317 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 IL34Q6ZMJ4 242 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 H1FOOQ8IZA3 346 aaPredicted RBP8.06□□□□□ -1.12
HMGN1-215ENST00000485550 TEX45Q8NA69 505 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 OR9G4Q8NGQ1 327 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 DDB2Q92466 427 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 TMEM68Q96MH6 324 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 NDUFB11Q9NX14 153 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 BLOC1S6Q9UL45 172 aa8.06□□□□□ -1.12
HMGN1-215ENST00000485550 FCGR3BO75015 233 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 TUSC2O75896 110 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 OR9G9P0C7N8 305 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 RRASP10301 218 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 AADACP22760 399 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 PSMB9P28065 219 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 HSPA13P48723 471 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 UBE2KP61086 200 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 RPL30P62888 115 aaKnown RBP8.05□□□□□ -1.12
HMGN1-215ENST00000485550 RPEL1Q2QD12 228 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 C10orf55Q5SWW7 151 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 ZNF343Q6P1L6 599 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 SGPP2Q8IWX5 399 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 ADAD2Q8NCV1 583 aaKnown RBP8.05□□□□□ -1.12
HMGN1-215ENST00000485550 NUDCD2Q8WVJ2 157 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 SRSF12Q8WXF0 261 aaKnown RBP8.05□□□□□ -1.12
HMGN1-215ENST00000485550 ADTRPQ96IZ2 230 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 ZNF430Q9H8G1 570 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-215ENST00000485550 HERC2O95714 4834 aa8.05□□□□□ -1.12
HMGN1-215ENST00000485550 IZUMO1RA6ND01 250 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 TMEM235A6NFC5 223 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 ERICH4A6NGS2 130 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 DIRAS3O95661 229 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 CSN3P07498 182 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 SAA1P0DJI8 122 aaPredicted RBP8.04□□□□□ -1.12
HMGN1-215ENST00000485550 RHOGP84095 191 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 TATDN3Q17R31 274 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 VKORC1L1Q8N0U8 176 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 OSR1Q8TAX0 266 aaPredicted RBP8.04□□□□□ -1.12
HMGN1-215ENST00000485550 USMG5Q96IX5 58 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 AKIP1Q9NQ31 210 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 C19orf73Q9NVV2 129 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 TXNL4BQ9NX01 149 aaKnown RBP8.04□□□□□ -1.12
HMGN1-215ENST00000485550 DAPK2Q9UIK4 370 aa8.04□□□□□ -1.12
HMGN1-215ENST00000485550 IGKV1D-13A0A0B4J2D9 117 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 HMX3A6NHT5 357 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 NOTOA8MTQ0 251 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 H0Y980 276 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 ACTL6BO94805 426 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 BRI3O95415 125 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 IGKV1-13P0DP09 117 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 DTYMKP23919 212 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 GNG2P59768 71 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 ZNF45Q02386 682 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 MXD1Q05195 221 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 ATP5G2Q06055 141 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 EXOSC2Q13868 293 aaKnown RBP8.03□□□□□ -1.12
HMGN1-215ENST00000485550 ARL6IP1Q15041 203 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 HACD4Q5VWC8 232 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 Q6ZS49 121 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 C19orf35Q6ZS72 473 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 KCTD9Q7L273 389 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 SPARTQ8N0X7 666 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 ZNF645Q8N7E2 425 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 SNAPC3Q92966 411 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 GPHA2Q96T91 129 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 CENPOQ9BU64 300 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 TUBA4BQ9H853 241 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 RAB26Q9ULW5 256 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 SPATA2Q9UM82 520 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 RBMX2Q9Y388 322 aaKnown RBP8.03□□□□□ -1.12
HMGN1-215ENST00000485550 PRELID3BQ9Y3B1 194 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 RRP15Q9Y3B9 282 aaKnown RBP8.03□□□□□ -1.12
HMGN1-215ENST00000485550 OR2W1Q9Y3N9 320 aa8.03□□□□□ -1.12
HMGN1-215ENST00000485550 OR2J3O76001 311 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 IGLV2-14P01704 120 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 HLA-DQB1P01920 261 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 FCER2P06734 321 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 CTXN2P0C2S0 81 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 CLEC2LP0C7M8 214 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 PTHLHP12272 177 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 CDK10Q15131 360 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 HAGHQ16775 308 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 UBE2UQ5VVX9 321 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 MMD2Q8IY49 270 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 LGALS14Q8TCE9 139 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 TCTEX1D2Q8WW35 142 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 SPIN2AQ99865 258 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 SPIN2BQ9BPZ2 258 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 SPATA25Q9BR10 227 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 OR51E2Q9H255 320 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms