RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 A0A087WUU8 490 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 UBE2L6O14933 153 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 TTRP02766 147 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 LPAR6P43657 344 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 TBPL1P62380 186 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 POLR2GP62487 172 aaKnown RBP eCLIP2.42□□□□□ -2.02
VPS13A-211ENST00000484581 HTR4Q13639 388 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 CST6Q15828 149 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 TNFAIP8L3Q5GJ75 292 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 GPR119Q8TDV5 335 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 SFRP2Q96HF1 295 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 CNBD2Q96M20 576 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 TM2D3Q9BRN9 247 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 C9orf16Q9BUW7 83 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 ULBP3Q9BZM4 244 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 TMEM222Q9H0R3 208 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 C16orf95Q9H693 158 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 PRELID3BQ9Y3B1 194 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 DOCK6Q96HP0 2047 aa2.42□□□□□ -2.02
VPS13A-211ENST00000484581 TRPM3Q9HCF6 1732 aaPredicted RBP2.42□□□□□ -2.02
VPS13A-211ENST00000484581 ITGB4P16144 1822 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 C19orf71A6NCJ1 209 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 A8MUN3 132 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 C17orf98A8MV24 154 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 LST1O00453 97 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 TP53I11O14683 189 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 SERPINA1P01009 418 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 CRHBPP24387 322 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 COL8A2P25067 703 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 HIST1H3AP68431 136 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 H3F3AP84243 136 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 ZNF117Q03924 483 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 GLO1Q04760 184 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 GLT6D1Q7Z4J2 308 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 OR6V1Q8N148 313 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 PHOSPHO2Q8TCD6 241 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 RPS4Y2Q8TD47 263 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 RNASE6Q93091 150 aaKnown RBP2.41□□□□□ -2.02
VPS13A-211ENST00000484581 TRIM4Q9C037 500 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 DOK5Q9P104 306 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 ARL5AQ9Y689 179 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 LTBP4Q8N2S1 1624 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 NCOA1Q15788 1441 aa2.41□□□□□ -2.02
VPS13A-211ENST00000484581 GRIN2BQ13224 1484 aa2.4□□□□□ -2.02
VPS13A-211ENST00000484581 KNCNA6PVL3 124 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 OR11H12B2RN74 326 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 NOS1APO75052 506 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-211ENST00000484581 IGHV1-69P01742 117 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 KCNE1P15382 129 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 SERPINB10P48595 397 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 RBM11P57052 281 aaKnown RBP2.4□□□□□ -2.03
VPS13A-211ENST00000484581 GUK1Q16774 197 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 IAH1Q2TAA2 248 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-211ENST00000484581 FAM229BQ4G0N7 80 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 LPCAT3Q6P1A2 487 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 SPATA12Q7Z6I5 190 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 KRT222Q8N1A0 295 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 LYPD1Q8N2G4 141 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 OR11H2Q8NH07 326 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 OR4X1Q8NH49 305 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 BORCS7Q96B45 105 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 PKMYT1Q99640 499 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 PRELID1Q9Y255 219 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 PKIGQ9Y2B9 76 aa2.4□□□□□ -2.03
VPS13A-211ENST00000484581 OR5K4A6NMS3 321 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 OR2B3O76000 313 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 CNIH1O95406 144 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 CDS2O95674 445 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 CST2P09228 141 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 RNASE2P10153 161 aaKnown RBP2.39□□□□□ -2.03
VPS13A-211ENST00000484581 CD200P41217 278 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 PPP1R2P41236 205 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 RPL27AP46776 148 aaKnown RBP2.39□□□□□ -2.03
VPS13A-211ENST00000484581 GABRA2P47869 451 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 GNA12Q03113 381 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 BAMBIQ13145 260 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 CDK10Q15131 360 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 PYDC2Q56P42 97 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 GLT8D1Q68CQ7 371 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 PPP1R2P3Q6NXS1 205 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 PACRGLQ8N7B6 248 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 CNEP1R1Q8N9A8 125 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 OR10D4PQ8NGN7 298 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 CMTM2Q8TAZ6 248 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 LMX1AQ8TE12 382 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 BTF3L4Q96K17 158 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 SIGMAR1Q99720 223 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 TXNL4BQ9NX01 149 aaKnown RBP2.39□□□□□ -2.03
VPS13A-211ENST00000484581 CMTM6Q9NX76 183 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 STOML2Q9UJZ1 356 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 MMACHCQ9Y4U1 282 aa2.39□□□□□ -2.03
VPS13A-211ENST00000484581 WRNQ14191 1432 aaPredicted RBP eCLIP2.39□□□□□ -2.03
VPS13A-211ENST00000484581 COL1A2P08123 1366 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 CCDC144AA2RUR9 1427 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 OR4C46A6NHA9 309 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 UBFD1O14562 309 aaKnown RBP2.38□□□□□ -2.03
VPS13A-211ENST00000484581 PLA2G10O15496 165 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 OR5F1O95221 314 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 SOD1P00441 154 aa2.38□□□□□ -2.03
VPS13A-211ENST00000484581 IGLV6-57P01721 117 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms