RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TMEM50AO95807 157 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 GAPDHP04406 335 aaKnown RBP8.15□□□□□ -1.1
HDAC6-226ENST00000483656 MSMBP08118 114 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 RRASP10301 218 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 NQO2P16083 231 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 HTR1DP28221 377 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 NKX2-1P43699 371 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-226ENST00000483656 IFITM2Q01629 132 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 TAGLNQ01995 201 aaKnown RBP8.15□□□□□ -1.1
HDAC6-226ENST00000483656 LOXL1Q08397 574 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-226ENST00000483656 DHRS7BQ6IAN0 325 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-226ENST00000483656 PRSS57Q6UWY2 283 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 SSX9Q7RTT3 188 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 C17orf50Q8WW18 174 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 LHX4Q969G2 390 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 RITA1Q96K30 269 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 MFFQ9GZY8 342 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 MAGT1Q9H0U3 335 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 COA4Q9NYJ1 87 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 CSMD2Q7Z408 3487 aa8.15□□□□□ -1.11
HDAC6-226ENST00000483656 FAM90A9PA6NNJ1 464 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 LEUTXA8MZ59 168 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 B4DSR2 109 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 IGLV2-23P01705 113 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 APOA2P02652 100 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 PAX6P26367 422 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 UBE2E1P51965 193 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 PAX9P55771 341 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 RELBQ01201 579 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 RTL8BQ17RB0 113 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 AARDQ4LEZ3 155 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 OR4A47Q6IF82 309 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 TMUB2Q71RG4 321 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 H2BFWTQ7Z2G1 175 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 MOB3BQ86TA1 216 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 PDPNQ86YL7 162 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 KCNRGQ8N5I3 272 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 MAPK1IP1LQ8NDC0 245 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 CFHR4Q92496 578 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 DCUN1D4Q92564 292 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 RPEQ96AT9 228 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 RHOVQ96L33 236 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 REG4Q9BYZ8 158 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-226ENST00000483656 TMEM140Q9NV12 185 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 NSG2Q9Y328 171 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 WASHC3Q9Y3C0 194 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 WNK2Q9Y3S1 2297 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 AKAP9Q99996 3911 aa8.14□□□□□ -1.11
HDAC6-226ENST00000483656 CENPVL3A0A0U1RRI6 287 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 E5RGE8 158 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 H7C2Y5 167 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 L7N2F9 121 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 TXNL1O43396 289 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 CHST1O43916 411 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 HRASP01112 189 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 RLN2P04090 185 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 HKR1P10072 659 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 MC5RP33032 325 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 ARHGDIBP52566 201 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 HABP2Q14520 560 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-226ENST00000483656 OPCMLQ14982 345 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 FBLN7Q53RD9 439 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 MINOS1Q5TGZ0 78 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 ACOT7LQ6ZUV0 252 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 PUSL1Q8N0Z8 303 aaKnown RBP8.13□□□□□ -1.11
HDAC6-226ENST00000483656 LINC01356Q8N9X3 169 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 OSR1Q8TAX0 266 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-226ENST00000483656 FLYWCH2Q96CP2 140 aaKnown RBP8.13□□□□□ -1.11
HDAC6-226ENST00000483656 BSCL2Q96G97 398 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-226ENST00000483656 Q96MF0 132 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 QTRT1Q9BXR0 403 aaKnown RBP8.13□□□□□ -1.11
HDAC6-226ENST00000483656 ZFP57Q9NU63 452 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 HSPB7Q9UBY9 170 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 HILPDAQ9Y5L2 63 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 MINOS1-NBL1R4GNA1 71 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 FBN3Q75N90 2809 aa8.13□□□□□ -1.11
HDAC6-226ENST00000483656 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 FAM90A26D6RGX4 464 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 UPK2O00526 184 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 TIMM23O14925 209 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 SHOXO15266 292 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 SSSCA1O60232 199 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 OR2F2O95006 317 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 AVPP01185 164 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 PET100P0DJ07 73 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 SAA1P0DJI8 122 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-226ENST00000483656 IGHV4-31P0DP07 118 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 MYOD1P15172 320 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 S100A11P31949 105 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 CEACAM3P40198 252 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 P2RY1P47900 373 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 RAB13P51153 203 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 AP2S1P53680 142 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-226ENST00000483656 OR2B8PP59922 312 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 ERVK-16P61578 105 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 RPS16P62249 146 aaKnown RBP8.12□□□□□ -1.11
HDAC6-226ENST00000483656 TNFRSF9Q07011 255 aa8.12□□□□□ -1.11
HDAC6-226ENST00000483656 OR2F1Q13607 317 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms