RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 RNF152Q8N8N0 203 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 ABHD5Q8WTS1 349 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 ARPC1AQ92747 370 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 R3HDM4Q96D70 268 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 TINAGL1Q9GZM7 467 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-214ENST00000482733 TPSG1Q9NRR2 321 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 WSB1Q9Y6I7 421 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 PGLYRP1O75594 196 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-214ENST00000482733 CNIH1O95406 144 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 RAB3DO95716 219 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 PPIFP30405 207 aaKnown RBP13.01□□□□□ -0.33
HMGN1-214ENST00000482733 BRWD1-AS2P59051 145 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 RPL23AP62750 156 aaKnown RBP13.01□□□□□ -0.33
HMGN1-214ENST00000482733 MEF2DQ14814 521 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 AKIRIN2Q53H80 203 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 STEAP1BQ6NZ63 245 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 MINDY2Q8NBR6 621 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 FAM110DQ8TAY7 271 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-214ENST00000482733 GPHA2Q96T91 129 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 NUBP2Q9Y5Y2 271 aa13.01□□□□□ -0.33
HMGN1-214ENST00000482733 TET2Q6N021 2002 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-214ENST00000482733 FBN3Q75N90 2809 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 A0A1W2PRX2 142 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 DPPA5A6NC42 116 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 G3V318 75 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 HPRT1P00492 218 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 SAA1P0DJI8 122 aaPredicted RBP13□□□□□ -0.33
HMGN1-214ENST00000482733 PF4V1P10720 104 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 PTBP1P26599 531 aaKnown RBP eCLIP13□□□□□ -0.33
HMGN1-214ENST00000482733 PRSS8Q16651 343 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 ECSCRQ19T08 205 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 TMEM65Q6PI78 240 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 LHFPL1Q86WI0 220 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 OR51H1Q8NH63 302 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 TMEM68Q96MH6 324 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 RSRP1Q9BUV0 290 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 FBXO7Q9Y3I1 522 aa13□□□□□ -0.33
HMGN1-214ENST00000482733 ARPC1BO15143 372 aaKnown RBP12.99□□□□□ -0.33
HMGN1-214ENST00000482733 ACTL6BO94805 426 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 OR2A4O95047 310 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 IGLV1-40P01703 118 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 RLN1P04808 185 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 EGR2P11161 476 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-214ENST00000482733 PSMB8P28062 276 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 CD40LGP29965 261 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 TAS2R31P59538 309 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 GNB1P62873 340 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 PJVKQ0ZLH3 352 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 C19orf54Q5BKX5 351 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 MMD2Q8IY49 270 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 OR5M8Q8NGP6 311 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 ZNF486Q96H40 463 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-214ENST00000482733 RHOVQ96L33 236 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 OR2A7Q96R45 310 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 PLEKHA2Q9HB19 425 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 FOXA2Q9Y261 457 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-214ENST00000482733 CMYA5Q8N3K9 4069 aa12.99□□□□□ -0.33
HMGN1-214ENST00000482733 A0A1W2PN81 502 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 DISC1C4P0D8 188 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 RAMP3O60896 148 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 RPLP1P05386 114 aaKnown RBP12.98□□□□□ -0.33
HMGN1-214ENST00000482733 AKAIN1P0CW23 69 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 NQO2P16083 231 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 F2RP25116 425 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 CHRNA7P36544 502 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 ECI1P42126 302 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 CDX1P47902 265 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-214ENST00000482733 UNQ5815/PRO19632Q6UWF5 114 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 IDO2Q6ZQW0 420 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 PUSL1Q8N0Z8 303 aaKnown RBP12.98□□□□□ -0.33
HMGN1-214ENST00000482733 LFNGQ8NES3 379 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 OR4A5Q8NH83 315 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 TERB2Q8NHR7 220 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 GRPEL2Q8TAA5 225 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 FAM103A1Q9BTL3 118 aaKnown RBP12.98□□□□□ -0.33
HMGN1-214ENST00000482733 FAM212BQ9NTI7 297 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-214ENST00000482733 COMMD9Q9P000 198 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 PKD1L1Q8TDX9 2849 aa12.98□□□□□ -0.33
HMGN1-214ENST00000482733 MGAM2Q2M2H8 2515 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 NUDT19A8MXV4 375 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 KBTBD11O94819 623 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 PGAM2P15259 253 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 MAS1LP35410 378 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 SSBP2P81877 361 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-214ENST00000482733 TNXAQ16473 311 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 POU2AF1Q16633 256 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 MRGPRG-AS1Q2M3A8 158 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 PHLDA2Q53GA4 152 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 PYDC2Q56P42 97 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 SPANXN2Q5MJ10 180 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 CCDC190Q86UF4 302 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 ZNF695Q8IW36 515 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 VKORC1L1Q8N0U8 176 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 KLHL30-AS1Q8NEE0 82 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 OR4D10Q8NGI6 311 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 TMEM167AQ8TBQ9 72 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 ZFAND1Q8TCF1 268 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 THAP7Q9BT49 309 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-214ENST00000482733 ZNF430Q9H8G1 570 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms