RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 K7EIL1 84 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 RAMP3O60896 148 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 ACTL6BO94805 426 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 GABARAPO95166 117 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 BRI3O95415 125 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 APOA1P02647 267 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 EIF4EP06730 217 aaKnown RBP9.2□□□□□ -0.94
HMGN1-213ENST00000482192 SAA1P0DJI8 122 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-213ENST00000482192 PRSS3P35030 304 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 KIR2DS2P43631 304 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 RORCP51449 518 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 ANKRD13BQ86YJ7 626 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 MMD2Q8IY49 270 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 MFSD4AQ8N468 514 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 OR5T1Q8NG75 326 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 VSTM2AQ8TAG5 236 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 GIMAP1Q8WWP7 306 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 BORCS5Q969J3 196 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 SLC5A7Q9GZV3 580 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 ALX4Q9H161 411 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-213ENST00000482192 ZNF430Q9H8G1 570 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-213ENST00000482192 CCL28Q9NRJ3 127 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 COMMD3Q9UBI1 195 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 ANAPC10Q9UM13 185 aa9.2□□□□□ -0.94
HMGN1-213ENST00000482192 A0A0G2JLM5 398 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 C13orf42A0A1B0GVH6 325 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 WI2-2373I1.2A0A1W2PRP0 233 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 MSGN1A6NI15 193 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 MPPED1O15442 326 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 TNFSF12O43508 249 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 IGHV3-11P01762 117 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 HSPB1P04792 205 aaKnown RBP9.19□□□□□ -0.94
HMGN1-213ENST00000482192 INSL3P51460 131 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 TAS2R46P59540 309 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 FXYD4P59646 89 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 HERV-K104P61576 105 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 CATR1Q13166 79 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 CTF1Q16619 201 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 SRSF12Q8WXF0 261 aaKnown RBP9.19□□□□□ -0.94
HMGN1-213ENST00000482192 AP3S1Q92572 193 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 RHOVQ96L33 236 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 SPIN2AQ99865 258 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 SPIN2BQ9BPZ2 258 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 MRPS26Q9BYN8 205 aaKnown RBP9.19□□□□□ -0.94
HMGN1-213ENST00000482192 EHFQ9NZC4 300 aa9.19□□□□□ -0.94
HMGN1-213ENST00000482192 IGHV4OR15-8A0A075B7B6 117 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 A0A087WW49 117 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 OVOL1O14753 267 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 KBTBD11O94819 623 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 OR2A4O95047 310 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 HRASP01112 189 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 OR9G9P0C7N8 305 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 NAT1P18440 290 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 BRWD1-AS2P59051 145 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 DCTN2Q13561 401 aaKnown RBP9.18□□□□□ -0.94
HMGN1-213ENST00000482192 DYRK1AQ13627 763 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 GPR107Q5VW38 600 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 MZT2AQ6P582 158 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 DHRS11Q6UWP2 260 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 TMEM17Q86X19 198 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 VKORC1L1Q8N0U8 176 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 ADAD2Q8NCV1 583 aaKnown RBP9.18□□□□□ -0.94
HMGN1-213ENST00000482192 OR5H2Q8NGV7 314 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 DCUN1D4Q92564 292 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 OR2A7Q96R45 310 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 GPHA2Q96T91 129 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 AIFM2Q9BRQ8 373 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 TINAGL1Q9GZM7 467 aaPredicted RBP9.18□□□□□ -0.94
HMGN1-213ENST00000482192 NAA50Q9GZZ1 169 aaKnown RBP9.18□□□□□ -0.94
HMGN1-213ENST00000482192 SCPEP1Q9HB40 452 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 COA4Q9NYJ1 87 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 SCOCQ9UIL1 159 aa9.18□□□□□ -0.94
HMGN1-213ENST00000482192 NOTCH3Q9UM47 2321 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 SULT1C2O00338 296 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 RBFOX2O43251 390 aaKnown RBP eCLIP9.17□□□□□ -0.941e-18■□□□□ 8.3
HMGN1-213ENST00000482192 HPGDSO60760 199 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 PMP2P02689 132 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 APELAP0DMC3 54 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 ELK1P19419 428 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 ECI1P42126 302 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 SLURP1P55000 103 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 DEFB121Q5J5C9 76 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 ZNF818PQ6ZRF7 136 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 GPR141Q7Z602 305 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 SPAG16Q8N0X2 631 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 PUSL1Q8N0Z8 303 aaKnown RBP9.17□□□□□ -0.94
HMGN1-213ENST00000482192 TMEM167AQ8TBQ9 72 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 GPX8Q8TED1 209 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 DLX4Q92988 240 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-213ENST00000482192 MOB3AQ96BX8 217 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 USMG5Q96IX5 58 aa9.17□□□□□ -0.94
HMGN1-213ENST00000482192 ZNF2Q9BSG1 426 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-213ENST00000482192 RANGRFQ9HD47 186 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-213ENST00000482192 CMYA5Q8N3K9 4069 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 ZNF182P17025 639 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-213ENST00000482192 ZP3P21754 424 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 GNRHRP30968 328 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 HRH1P35367 487 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 MAS1LP35410 378 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 RFX2P48378 723 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms