RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 BVESQ8NE79 360 aa7.47□□□□□ -1.21
TMEM39A-207ENST00000482162 MAFIPQ8WZ33 124 aa7.47□□□□□ -1.21
TMEM39A-207ENST00000482162 WWC2-AS2Q96NR7 200 aa7.47□□□□□ -1.21
TMEM39A-207ENST00000482162 CLCC1Q96S66 551 aa7.47□□□□□ -1.21
TMEM39A-207ENST00000482162 ATG5Q9H1Y0 275 aa7.47□□□□□ -1.21
TMEM39A-207ENST00000482162 SPATA2Q9UM82 520 aa7.47□□□□□ -1.21
TMEM39A-207ENST00000482162 TUSC2O75896 110 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 TRGV3P03979 118 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 CD40LGP29965 261 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 BRWD1-AS2P59051 145 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 TPPP2P59282 170 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 KLF5Q13887 457 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 RTL8BQ17RB0 113 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 ZNF343Q6P1L6 599 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 CNIH2Q6PI25 160 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 IL34Q6ZMJ4 242 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 OVCH2Q7RTZ1 564 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 SAMD12Q8N8I0 201 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 ADAD2Q8NCV1 583 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 GRPEL2Q8TAA5 225 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 OSR1Q8TAX0 266 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 LGALS14Q8TCE9 139 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 MS4A10Q96PG2 267 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 TINAGL1Q9GZM7 467 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 COMMD3Q9UBI1 195 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 RABL2AQ9UBK7 228 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 RABL2BQ9UNT1 228 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 OR2W1Q9Y3N9 320 aa7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 KMT2CQ8NEZ4 4911 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-207ENST00000482162 A0A0A6YYH2 397 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 A0A0G2JLM5 398 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 MSGN1A6NI15 193 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 A6NJ64 397 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 SHOXO15266 292 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 RBMXL2O75526 392 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 SLC22A5O76082 557 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 IGHV3-11P01762 117 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 APOA1P02647 267 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 AADACP22760 399 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 RPL30P62888 115 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 MSMO1Q15800 293 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 KLK9Q2XQG4 91 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 SPANXN2Q5MJ10 180 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 ZNF645Q8N7E2 425 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 OR5T1Q8NG75 326 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 ABHD5Q8WTS1 349 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 S100ZQ8WXG8 99 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 SLC25A38Q96DW6 304 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 S100A16Q96FQ6 103 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 USMG5Q96IX5 58 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 HARBI1Q96MB7 349 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 TSC22D3Q99576 134 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 GINS4Q9BRT9 223 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 ST6GALNAC5Q9BVH7 336 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 RANGRFQ9HD47 186 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 RHBDL2Q9NX52 303 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 KLK9Q9UKQ9 250 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 RBMX2Q9Y388 322 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 SMAD5-AS1Q9Y6J3 95 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 U3KQK5 164 aa7.45□□□□□ -1.22
TMEM39A-207ENST00000482162 TRBV9A0A0B4J1U6 114 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 IGKV1D-13A0A0B4J2D9 117 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 TMEM235A6NFC5 223 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 FAM25AB3EWG3 89 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 FAM25CB3EWG5 89 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 FAM25GB3EWG6 89 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 CNIH1O95406 144 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 CRYZL1O95825 349 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 IGKV1-13P0DP09 117 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 SPNP16150 400 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 ZP3P21754 424 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 MECP2P51608 486 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 DYRK1AQ13627 763 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 Q8N1Y9 231 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 OR6Q1Q8NGQ2 317 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 OR5H6Q8NGV6 325 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 C15orf40Q8WUR7 153 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 DIABLOQ9NR28 239 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 SIGLEC8Q9NYZ4 499 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 ANXA10Q9UJ72 324 aa7.44□□□□□ -1.22
TMEM39A-207ENST00000482162 A8MZ25 164 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 CTDSP2O14595 271 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 HPGDSO60760 199 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 SAP30O75446 220 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 TPPPO94811 219 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 OR9G9P0C7N8 305 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 GP9P14770 177 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 NFYAP23511 347 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 PTBP1P26599 531 aaKnown RBP eCLIP7.43□□□□□ -1.226e-11■■■■■ 31.5
TMEM39A-207ENST00000482162 CBX3Q13185 183 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 CDK10Q15131 360 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 VMA21Q3ZAQ7 101 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 LAX1Q8IWV1 398 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 TTC9CQ8N5M4 171 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 NUDCD2Q8WVJ2 157 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 SRSF12Q8WXF0 261 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 DIRAS2Q96HU8 199 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 OR4C12Q96R67 309 aa7.43□□□□□ -1.22
TMEM39A-207ENST00000482162 HSD17B10Q99714 261 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms