RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 FAM213BQ8TBF2 198 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 CLCC1Q96S66 551 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 ZNF251Q9BRH9 671 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 F8W036 122 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 SCO1O75880 301 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 RAB2AP61019 212 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 TLE4Q04727 773 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 SRSF1Q07955 248 aaKnown RBP eCLIP12.95□□□□□ -0.34
RXRA-202ENST00000481739 PEA15Q15121 130 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 POU2AF1Q16633 256 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 LRRC75BQ2VPJ9 315 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 FAM71F2Q6NXP2 309 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 ZNF429Q86V71 674 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 PUSL1Q8N0Z8 303 aaKnown RBP12.95□□□□□ -0.34
RXRA-202ENST00000481739 LYG1Q8N1E2 194 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 OR4A16Q8NH70 328 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 TIMM9Q9Y5J7 89 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 UTP20O75691 2785 aaKnown RBP12.94□□□□□ -0.34
RXRA-202ENST00000481739 TRBV23-1A0A0A0MS06 115 aa12.94□□□□□ -0.34
RXRA-202ENST00000481739 A0A1W2PPR1 153 aa12.94□□□□□ -0.34
RXRA-202ENST00000481739 CEBPZOSA8MTT3 80 aa12.94□□□□□ -0.34
RXRA-202ENST00000481739 HRASP01112 189 aa12.94□□□□□ -0.34
RXRA-202ENST00000481739 HBE1P02100 147 aa12.94□□□□□ -0.34
RXRA-202ENST00000481739 DEFA5Q01523 94 aa12.94□□□□□ -0.34
RXRA-202ENST00000481739 SLC38A11Q08AI6 406 aa12.94□□□□□ -0.34
RXRA-202ENST00000481739 OR10P1Q8NGE3 313 aa12.94□□□□□ -0.34
RXRA-202ENST00000481739 SOD3P08294 240 aa12.93□□□□□ -0.34
RXRA-202ENST00000481739 ZNF273Q14593 569 aa12.93□□□□□ -0.34
RXRA-202ENST00000481739 RTL8BQ17RB0 113 aa12.93□□□□□ -0.34
RXRA-202ENST00000481739 TMEM147Q9BVK8 224 aa12.93□□□□□ -0.34
RXRA-202ENST00000481739 RAB1BQ9H0U4 201 aa12.93□□□□□ -0.34
RXRA-202ENST00000481739 RAI1Q7Z5J4 1906 aaPredicted RBP12.93□□□□□ -0.34
RXRA-202ENST00000481739 GPR37O15354 613 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 SNAPINO95295 136 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 GNB2P62879 340 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 AKR1C1Q04828 323 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 TMEM200BQ69YZ2 307 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 HAPLN4Q86UW8 402 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 THNSL2Q86YJ6 484 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 LINC00311Q8N616 119 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 ZNF596Q8TC21 504 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 NKX6-2Q9C056 277 aaPredicted RBP12.92□□□□□ -0.34
RXRA-202ENST00000481739 WDR61Q9GZS3 305 aaKnown RBP12.92□□□□□ -0.34
RXRA-202ENST00000481739 TMEM140Q9NV12 185 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 COL12A1Q99715 3063 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 TRAV1-1A0A0B4J248 108 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 A1L4Q6 167 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 DVL1O14640 695 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 IFNA17P01571 189 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 H2AFB1P0C5Y9 115 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 OR9G9P0C7N8 305 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 ADCYAP1P18509 176 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 LINC00205P59089 165 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 SRSF3P84103 164 aaKnown RBP12.92□□□□□ -0.34
RXRA-202ENST00000481739 ARL16Q0P5N6 197 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 GUK1Q16774 197 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 LEAP2Q969E1 77 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 RBMXL1Q96E39 390 aaKnown RBP12.92□□□□□ -0.34
RXRA-202ENST00000481739 OR4C12Q96R67 309 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 SPOCK3Q9BQ16 436 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 KIAA1456Q9P272 454 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 KPTNQ9Y664 436 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 LRRK2Q5S007 2527 aa12.92□□□□□ -0.34
RXRA-202ENST00000481739 AGPAT2O15120 278 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 SOX15O60248 233 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 IGHV3-7P01780 117 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 SFTA3P0C7M3 94 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 FHITP49789 147 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 RUNX1Q01196 453 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 RELBQ01201 579 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 ZNF833PQ6ZTB9 187 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
RXRA-202ENST00000481739 ZNF383Q8NA42 475 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 RHOVQ96L33 236 aa12.91□□□□□ -0.34
RXRA-202ENST00000481739 A0A087X0M5 115 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 A0A1B0GX30 115 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 C15orf61A6NNL5 157 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 LYNX1G3V0Z9 82 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 MMP23AO75900 390 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 ARG1P05089 322 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 LYNX1P0DP58 116 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 GNG10P50151 68 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 VWC2Q2TAL6 325 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 DTX2Q86UW9 622 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 H1FXQ92522 213 aaKnown RBP12.9□□□□□ -0.34
RXRA-202ENST00000481739 TAF15Q92804 592 aaKnown RBP eCLIP12.9□□□□□ -0.34
RXRA-202ENST00000481739 QTRT1Q9BXR0 403 aaKnown RBP12.9□□□□□ -0.34
RXRA-202ENST00000481739 TMEM231Q9H6L2 316 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 CTSZQ9UBR2 303 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 FOXA2Q9Y261 457 aaPredicted RBP12.9□□□□□ -0.34
RXRA-202ENST00000481739 FAM96BQ9Y3D0 163 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 A0A1W2PPH5 198 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 PMS2P5A8MQ11 134 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 FAM157AC9JC47 383 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 GOSR1O95249 250 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 APOA2P02652 100 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 BTN1A1Q13410 526 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 OR8G2PQ6IF36 304 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms