RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ASCL2Q99929 193 aa9.29□□□□□ -0.92
SQSTM1-207ENST00000481335 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
SQSTM1-207ENST00000481335 ETV7Q9Y603 341 aa9.29□□□□□ -0.92
SQSTM1-207ENST00000481335 TRBV9A0A0B4J1U6 114 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 MSGN1A6NI15 193 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 MPPED1O15442 326 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 AIREO43918 545 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 ATP6V1G2O95670 118 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 SAA1P0DJI8 122 aaPredicted RBP9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 SNRPBP14678 240 aaKnown RBP9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 MAS1LP35410 378 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 RPEL1Q2QD12 228 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 LCN12Q6JVE5 192 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 ZNF66Q6ZN08 573 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 SGPP2Q8IWX5 399 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 OR2K2Q8NGT1 345 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 ACOT12Q8WYK0 555 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 SNAPC3Q92966 411 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 RSRP1Q9BUV0 290 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 ST6GALNAC5Q9BVH7 336 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 ZNF430Q9H8G1 570 aaPredicted RBP9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 RHBDL2Q9NX52 303 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 PEMTQ9UBM1 199 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 DAPK2Q9UIK4 370 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 ANXA10Q9UJ72 324 aa9.28□□□□□ -0.92
SQSTM1-207ENST00000481335 TMEM235A6NFC5 223 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 TRIM64CA6NLI5 447 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 FCGR3BO75015 233 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 TUSC2O75896 110 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 KIR2DS2P43631 304 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 ZNF773Q6PK81 442 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 Q8N402 240 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 TTC9CQ8N5M4 171 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 NECAP1Q8NC96 275 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 LGALS14Q8TCE9 139 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 NUDCD2Q8WVJ2 157 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 TM2D3Q9BRN9 247 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 AIFM2Q9BRQ8 373 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 OR51E2Q9H255 320 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 ELF5Q9UKW6 265 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 ZNF257Q9Y2Q1 563 aa9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 RRP15Q9Y3B9 282 aaKnown RBP9.27□□□□□ -0.93
SQSTM1-207ENST00000481335 ANKRD34BA5PLL1 514 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 KBTBD11O94819 623 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 IGLV2-14P01704 120 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 FGF2P09038 288 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 IGHV4-30-4P0DP06 118 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 NFYAP23511 347 aaPredicted RBP9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 SYNJ2BPP57105 145 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 RHOGP84095 191 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 EIF4EBP1Q13541 118 aaPredicted RBP9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 IDO2Q6ZQW0 420 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 GTSCR1Q86UQ5 136 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 LAX1Q8IWV1 398 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 Q8N1Y9 231 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 ZBTB34Q8NCN2 500 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 MUC7Q8TAX7 377 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 OR2A7Q96R45 310 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 DCUN1D5Q9BTE7 237 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 C19orf73Q9NVV2 129 aa9.26□□□□□ -0.93
SQSTM1-207ENST00000481335 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 SMIM30A4D0T7 59 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 NPIPB5A8MRT5 1133 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 DHFRP00374 187 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 HRASP01112 189 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 SDC2P34741 201 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 ARPC4P59998 168 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 ATP5G2Q06055 141 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 EXOSC2Q13868 293 aaKnown RBP9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 KLK9Q2XQG4 91 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 TIMM50Q3ZCQ8 353 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 IL34Q6ZMJ4 242 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 CROCCP3Q8IVE0 287 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 PUSL1Q8N0Z8 303 aaKnown RBP9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 BEST4Q8NFU0 473 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 OR4A5Q8NH83 315 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 TMEM167AQ8TBQ9 72 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 TCTEX1D2Q8WW35 142 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 BORCS5Q969J3 196 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 CITED4Q96RK1 184 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 AKIP1Q9NQ31 210 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 KLK9Q9UKQ9 250 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 RYR3Q15413 4870 aa9.25□□□□□ -0.93
SQSTM1-207ENST00000481335 IGKV1D-13A0A0B4J2D9 117 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 RBFOX2O43251 390 aaKnown RBP eCLIP9.24□□□□□ -0.936e-19■□□□□ 9.3
SQSTM1-207ENST00000481335 SSX5O60225 188 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 CSN3P07498 182 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 IGKV1-13P0DP09 117 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 CBX5P45973 191 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 RPL30P62888 115 aaKnown RBP9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 KCTD21Q4G0X4 260 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 MFSD4AQ8N468 514 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 SLC25A38Q96DW6 304 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 THAP7Q9BT49 309 aaPredicted RBP9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 DIABLOQ9NR28 239 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 BET1LQ9NYM9 111 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 SPATA2Q9UM82 520 aa9.24□□□□□ -0.93
SQSTM1-207ENST00000481335 TEX22C9J3V5 150 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms