RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 NDPQ00604 133 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 FXYD3Q14802 87 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 MEF2DQ14814 521 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 ECSCRQ19T08 205 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 STEAP1BQ6NZ63 245 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 SLC38A6Q8IZM9 456 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 OR51H1Q8NH63 302 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 R3HDM4Q96D70 268 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 GPHA2Q96T91 129 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 TINAGL1Q9GZM7 467 aaPredicted RBP16.09■□□□□ 0.17
VARS-224ENST00000479051 DPPA5A6NC42 116 aa16.08■□□□□ 0.16
VARS-224ENST00000479051 ACTL6BO94805 426 aa16.08■□□□□ 0.16
VARS-224ENST00000479051 IGHG4P01861 327 aa16.08■□□□□ 0.16
VARS-224ENST00000479051 CD74P04233 296 aa16.08■□□□□ 0.16
VARS-224ENST00000479051 PF4V1P10720 104 aa16.08■□□□□ 0.16
VARS-224ENST00000479051 CRIP2P52943 208 aaPredicted RBP16.08■□□□□ 0.16
VARS-224ENST00000479051 CFHR3Q02985 330 aa16.08■□□□□ 0.16
VARS-224ENST00000479051 ADARB2-AS1A8MUL3 147 aa16.07■□□□□ 0.16
VARS-224ENST00000479051 G3V318 75 aa16.07■□□□□ 0.16
VARS-224ENST00000479051 PGLYRP1O75594 196 aaPredicted RBP16.07■□□□□ 0.16
VARS-224ENST00000479051 RLN1P04808 185 aa16.07■□□□□ 0.16
VARS-224ENST00000479051 SAA1P0DJI8 122 aaPredicted RBP16.07■□□□□ 0.16
VARS-224ENST00000479051 PGAM2P15259 253 aa16.07■□□□□ 0.16
VARS-224ENST00000479051 RPL23AP62750 156 aaKnown RBP16.07■□□□□ 0.16
VARS-224ENST00000479051 TMEM65Q6PI78 240 aa16.07■□□□□ 0.16
VARS-224ENST00000479051 GRPEL2Q8TAA5 225 aa16.07■□□□□ 0.16
VARS-224ENST00000479051 SOSTQ9BQB4 213 aa16.07■□□□□ 0.16
VARS-224ENST00000479051 FOXA2Q9Y261 457 aaPredicted RBP16.07■□□□□ 0.16
VARS-224ENST00000479051 NUDT19A8MXV4 375 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 DISC1C4P0D8 188 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 HPRT1P00492 218 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 AKAIN1P0CW23 69 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 CD40LGP29965 261 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 SLC6A1P30531 599 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 PRSS8Q16651 343 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 PHLDA2Q53GA4 152 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 AKIRIN2Q53H80 203 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 PYDC2Q56P42 97 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 SPANXN2Q5MJ10 180 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 UNQ5815/PRO19632Q6UWF5 114 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 IDO2Q6ZQW0 420 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 MMD2Q8IY49 270 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 RSRP1Q9BUV0 290 aa16.06■□□□□ 0.16
VARS-224ENST00000479051 A0A1W2PN81 502 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 RAMP3O60896 148 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 OR2A4O95047 310 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 PTBP1P26599 531 aaKnown RBP eCLIP16.05■□□□□ 0.16
VARS-224ENST00000479051 PPIFP30405 207 aaKnown RBP16.05■□□□□ 0.16
VARS-224ENST00000479051 CHRNA7P36544 502 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 BRWD1-AS2P59051 145 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 TAS2R31P59538 309 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 PJVKQ0ZLH3 352 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 TNXAQ16473 311 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 SCGB2B2Q4G0G5 96 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 RNF152Q8N8N0 203 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 MINDY2Q8NBR6 621 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 LFNGQ8NES3 379 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 OR5M8Q8NGP6 311 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 ZNF486Q96H40 463 aaPredicted RBP16.05■□□□□ 0.16
VARS-224ENST00000479051 RHOVQ96L33 236 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 TMEM68Q96MH6 324 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 OR2A7Q96R45 310 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 FAM103A1Q9BTL3 118 aaKnown RBP16.05■□□□□ 0.16
VARS-224ENST00000479051 PLEKHA2Q9HB19 425 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 FBXO7Q9Y3I1 522 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 NUBP2Q9Y5Y2 271 aa16.05■□□□□ 0.16
VARS-224ENST00000479051 RPLP1P05386 114 aaKnown RBP16.04■□□□□ 0.16
VARS-224ENST00000479051 NQO2P16083 231 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 F2RP25116 425 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 PSMB8P28062 276 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 ECI1P42126 302 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 ERVK-16P61578 105 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 LHFPL1Q86WI0 220 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 VKORC1L1Q8N0U8 176 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 KLHL30-AS1Q8NEE0 82 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 OR4D10Q8NGI6 311 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 TERB2Q8NHR7 220 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 ZFAND1Q8TCF1 268 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 PHB2Q99623 299 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 COMMD9Q9P000 198 aa16.04■□□□□ 0.16
VARS-224ENST00000479051 ARPC1BO15143 372 aaKnown RBP16.03■□□□□ 0.16
VARS-224ENST00000479051 KBTBD11O94819 623 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 IGLV1-40P01703 118 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 PF4P02776 101 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 EGR2P11161 476 aaPredicted RBP16.03■□□□□ 0.16
VARS-224ENST00000479051 PPP5CP53041 499 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 AP3S2P59780 193 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 CCDC190Q86UF4 302 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 ZNF695Q8IW36 515 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 OR4A5Q8NH83 315 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 THAP7Q9BT49 309 aaPredicted RBP16.03■□□□□ 0.16
VARS-224ENST00000479051 ZNF430Q9H8G1 570 aaPredicted RBP16.03■□□□□ 0.16
VARS-224ENST00000479051 PLXNB1O43157 2135 aa16.03■□□□□ 0.16
VARS-224ENST00000479051 ANKRD20A5PA0PJZ0 165 aa16.02■□□□□ 0.16
VARS-224ENST00000479051 MAS1LP35410 378 aa16.02■□□□□ 0.16
VARS-224ENST00000479051 FAUP35544 74 aaKnown RBP16.02■□□□□ 0.16
VARS-224ENST00000479051 CDX1P47902 265 aaPredicted RBP16.02■□□□□ 0.16
VARS-224ENST00000479051 C19orf54Q5BKX5 351 aa16.02■□□□□ 0.16
VARS-224ENST00000479051 SSX9Q7RTT3 188 aa16.02■□□□□ 0.16
VARS-224ENST00000479051 TBC1D26Q86UD7 250 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms