RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ZNF343Q6P1L6 599 aa8.87□□□□□ -0.99
VARS2-208ENST00000477052 NR2C2APQ86WQ0 139 aa8.87□□□□□ -0.99
VARS2-208ENST00000477052 ADAD2Q8NCV1 583 aaKnown RBP8.87□□□□□ -0.99
VARS2-208ENST00000477052 ACOT12Q8WYK0 555 aa8.87□□□□□ -0.99
VARS2-208ENST00000477052 DDB2Q92466 427 aa8.87□□□□□ -0.99
VARS2-208ENST00000477052 YIPF6Q96EC8 236 aa8.87□□□□□ -0.99
VARS2-208ENST00000477052 GINS4Q9BRT9 223 aa8.87□□□□□ -0.99
VARS2-208ENST00000477052 MRPS26Q9BYN8 205 aaKnown RBP8.87□□□□□ -0.99
VARS2-208ENST00000477052 EPPK1P58107 5090 aaKnown RBP8.87□□□□□ -0.99
VARS2-208ENST00000477052 IFITM5A6NNB3 132 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 MPPED1O15442 326 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 HLA-AP01891 365 aaKnown RBP8.86□□□□□ -0.99
VARS2-208ENST00000477052 HIST1H1DP16402 221 aaKnown RBP8.86□□□□□ -0.99
VARS2-208ENST00000477052 RAB3BP20337 219 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 GADD45AP24522 165 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 DUTP33316 252 aaKnown RBP8.86□□□□□ -0.99
VARS2-208ENST00000477052 RPL5P46777 297 aaKnown RBP8.86□□□□□ -0.99
VARS2-208ENST00000477052 RHOGP84095 191 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 ARFRP1Q13795 201 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 RPEL1Q2QD12 228 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 H1FOOQ8IZA3 346 aaPredicted RBP8.86□□□□□ -0.99
VARS2-208ENST00000477052 VKORC1L1Q8N0U8 176 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 SRSF12Q8WXF0 261 aaKnown RBP8.86□□□□□ -0.99
VARS2-208ENST00000477052 GPHA2Q96T91 129 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 FAM110AQ9BQ89 295 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 ST6GALNAC5Q9BVH7 336 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 ATG5Q9H1Y0 275 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 ZNF430Q9H8G1 570 aaPredicted RBP8.86□□□□□ -0.99
VARS2-208ENST00000477052 EDA2RQ9HAV5 297 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 AKIP1Q9NQ31 210 aa8.86□□□□□ -0.99
VARS2-208ENST00000477052 LCE6AA0A183 80 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 HMX3A6NHT5 357 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 BMPR1BO00238 502 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 IGHV3-23P01764 117 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 OR9G9P0C7N8 305 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 SAA1P0DJI8 122 aaPredicted RBP8.85□□□□□ -0.99
VARS2-208ENST00000477052 NFYAP23511 347 aaPredicted RBP8.85□□□□□ -0.99
VARS2-208ENST00000477052 TALDO1P37837 337 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 UBE2KP61086 200 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 RPL30P62888 115 aaKnown RBP8.85□□□□□ -0.99
VARS2-208ENST00000477052 CBX3Q13185 183 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 EXOSC2Q13868 293 aaKnown RBP8.85□□□□□ -0.99
VARS2-208ENST00000477052 VMA21Q3ZAQ7 101 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 TPRA1Q86W33 373 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 OR13F1Q8NGS4 319 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 THAP7Q9BT49 309 aaPredicted RBP8.85□□□□□ -0.99
VARS2-208ENST00000477052 DCUN1D5Q9BTE7 237 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 WFDC10AQ9H1F0 79 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 TUBA4BQ9H853 241 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 PLEKHA3Q9HB20 300 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 S4R3C0 116 aa8.85□□□□□ -0.99
VARS2-208ENST00000477052 IGKV1D-13A0A0B4J2D9 117 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 LOC100506127A0A0U1RQW1 187 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 PPP5D1E7EU14 171 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 H0Y980 276 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 FCGR3BO75015 233 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 TUSC2O75896 110 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 OR2J3O76001 311 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 IGKV1-13P0DP09 117 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 MYOD1P15172 320 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 AADACP22760 399 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 CDNFQ49AH0 187 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 TEX45Q8NA69 505 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 NUDCD2Q8WVJ2 157 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 ISOC1Q96CN7 298 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 USMG5Q96IX5 58 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 CENPOQ9BU64 300 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 LYSTQ99698 3801 aa8.84□□□□□ -0.99
VARS2-208ENST00000477052 NOTOA8MTQ0 251 aa8.83□□□□□ -1
VARS2-208ENST00000477052 A8MZ25 164 aa8.83□□□□□ -1
VARS2-208ENST00000477052 E7EUB6 86 aa8.83□□□□□ -1
VARS2-208ENST00000477052 AIREO43918 545 aa8.83□□□□□ -1
VARS2-208ENST00000477052 CD7P09564 240 aa8.83□□□□□ -1
VARS2-208ENST00000477052 RRASP10301 218 aa8.83□□□□□ -1
VARS2-208ENST00000477052 PTHLHP12272 177 aa8.83□□□□□ -1
VARS2-208ENST00000477052 RAB6AP20340 208 aa8.83□□□□□ -1
VARS2-208ENST00000477052 ALDH3B2P48448 385 aa8.83□□□□□ -1
VARS2-208ENST00000477052 ATP5G2Q06055 141 aa8.83□□□□□ -1
VARS2-208ENST00000477052 CD300EQ496F6 205 aaPredicted RBP8.83□□□□□ -1
VARS2-208ENST00000477052 LCN12Q6JVE5 192 aa8.83□□□□□ -1
VARS2-208ENST00000477052 GTSCR1Q86UQ5 136 aa8.83□□□□□ -1
VARS2-208ENST00000477052 SNAPC3Q92966 411 aa8.83□□□□□ -1
VARS2-208ENST00000477052 TMEM68Q96MH6 324 aa8.83□□□□□ -1
VARS2-208ENST00000477052 SPATA25Q9BR10 227 aa8.83□□□□□ -1
VARS2-208ENST00000477052 FUNDC2Q9BWH2 189 aa8.83□□□□□ -1
VARS2-208ENST00000477052 RNF167Q9H6Y7 350 aa8.83□□□□□ -1
VARS2-208ENST00000477052 A0A1B0GW64 132 aa8.82□□□□□ -1
VARS2-208ENST00000477052 METTL21EPA6NDL7 271 aa8.82□□□□□ -1
VARS2-208ENST00000477052 TMEM235A6NFC5 223 aa8.82□□□□□ -1
VARS2-208ENST00000477052 OR2A4O95047 310 aa8.82□□□□□ -1
VARS2-208ENST00000477052 OR2C1O95371 312 aa8.82□□□□□ -1
VARS2-208ENST00000477052 BRI3O95415 125 aa8.82□□□□□ -1
VARS2-208ENST00000477052 IGLV2-14P01704 120 aa8.82□□□□□ -1
VARS2-208ENST00000477052 FCER2P06734 321 aa8.82□□□□□ -1
VARS2-208ENST00000477052 SDC2P34741 201 aa8.82□□□□□ -1
VARS2-208ENST00000477052 MECP2P51608 486 aaKnown RBP8.82□□□□□ -1
VARS2-208ENST00000477052 CD81P60033 236 aa8.82□□□□□ -1
VARS2-208ENST00000477052 CDK10Q15131 360 aa8.82□□□□□ -1
VARS2-208ENST00000477052 TATDN3Q17R31 274 aa8.82□□□□□ -1
VARS2-208ENST00000477052 KCTD9Q7L273 389 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms