RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 KLRB1Q12918 225 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 ACSM6Q6P461 480 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 OR10G9Q8NGN4 311 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 OR10G7Q8NGN6 311 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 FAM222BQ8WU58 562 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 ITLN1Q8WWA0 313 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 ZNF251Q9BRH9 671 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 ACTR3CQ9C0K3 210 aaPredicted RBP13.62□□□□□ -0.23
TMEM53-208ENST00000476724 SDF2L1Q9HCN8 221 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 M0R1X1 148 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 AP4M1O00189 453 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 IGKV1D-33P01593 117 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 IGKV1-33P01594 117 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 CGB3P0DN86 165 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 CGB7P0DN87 165 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 RPS10P46783 165 aaKnown RBP13.62□□□□□ -0.23
TMEM53-208ENST00000476724 EDDM3BP56851 147 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 PDLIM3Q53GG5 364 aaPredicted RBP13.62□□□□□ -0.23
TMEM53-208ENST00000476724 ZNRF1Q8ND25 227 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 OR4A16Q8NH70 328 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 QTRT1Q9BXR0 403 aaKnown RBP13.62□□□□□ -0.23
TMEM53-208ENST00000476724 NPCDR1Q9BY65 106 aa13.62□□□□□ -0.23
TMEM53-208ENST00000476724 IGHV3OR15-7A0A075B7D8 119 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 SPRY3O43610 288 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 CYB5R3P00387 301 aaPredicted RBP13.61□□□□□ -0.23
TMEM53-208ENST00000476724 PSMB3P49720 205 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 LINC00205P59089 165 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 FABP9Q0Z7S8 132 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 FFAR4Q5NUL3 377 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 PRAMEF5Q5TYX0 476 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.61□□□□□ -0.23
TMEM53-208ENST00000476724 S1PR3Q99500 378 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 CALYQ9NYX4 217 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 RNF7Q9UBF6 113 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 IL19Q9UHD0 177 aa13.61□□□□□ -0.23
TMEM53-208ENST00000476724 A0A1W2PPE3 182 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 C15orf62A8K5M9 175 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 TMEM250H0YL14 139 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 CYB5BO43169 146 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 S100A9P06702 114 aaKnown RBP13.6□□□□□ -0.23
TMEM53-208ENST00000476724 OR9G9P0C7N8 305 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 NQO2P16083 231 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 MEF2BQ02080 365 aaPredicted RBP13.6□□□□□ -0.23
TMEM53-208ENST00000476724 RBPJQ06330 500 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 VHLLQ6RSH7 139 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 Q8WTZ3 238 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 SDSLQ96GA7 329 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 GGACTQ9BVM4 153 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 CTDSP1Q9GZU7 261 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 IFI27L2Q9H2X8 130 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 CACNA1AO00555 2505 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 CLDN34H7C241 214 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 MPDU1O75352 247 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 SMIM6P0DI80 62 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 S100A12P80511 92 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 ACOT6Q3I5F7 207 aaPredicted RBP13.6□□□□□ -0.23
TMEM53-208ENST00000476724 PRORYQ9H606 182 aa13.6□□□□□ -0.23
TMEM53-208ENST00000476724 RELNP78509 3460 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 DOCK11Q5JSL3 2073 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 PCP4L1A6NKN8 68 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 TGOLN2O43493 480 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 TNFSF4P23510 183 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 RND2P52198 227 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 ZNF134P52741 427 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 SPRNQ5BIV9 151 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 WDR25Q64LD2 544 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-208ENST00000476724 OR13D1Q8NGV5 346 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 DIRC2Q96SL1 478 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 JKAMPQ9P055 326 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 NAT8Q9UHE5 227 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 WDR83OSQ9Y284 106 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 TRGV8A0A0C4DH27 118 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 KBTBD11-OT1A0A1B0GTJ5 212 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 CD1BP29016 333 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 ERVFRD-1P60508 538 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 TFF3Q07654 80 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 LY6DQ14210 128 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 OR4S2Q8NH73 311 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 FAM234AQ9H0X4 552 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 GFOD1Q9NXC2 390 aa13.59□□□□□ -0.23
TMEM53-208ENST00000476724 SPTA1P02549 2419 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 CD81P60033 236 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 TNFAIP6P98066 277 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-208ENST00000476724 C17orf58Q2M2W7 97 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 TMEM30BQ3MIR4 351 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 RPL39P5Q59GN2 51 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 DDB2Q92466 427 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 ADTRPQ96IZ2 230 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 SLC25A22Q9H936 323 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 GCM1Q9NP62 436 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 HCFC1P51610 2035 aa13.58□□□□□ -0.24
TMEM53-208ENST00000476724 TRGV10A0A0A0MS01 117 aa13.57□□□□□ -0.24
TMEM53-208ENST00000476724 CXCL1P09341 107 aa13.57□□□□□ -0.24
TMEM53-208ENST00000476724 RELBQ01201 579 aa13.57□□□□□ -0.24
TMEM53-208ENST00000476724 TMEM249Q2WGJ8 235 aa13.57□□□□□ -0.24
TMEM53-208ENST00000476724 SPINK9Q5DT21 86 aa13.57□□□□□ -0.24
TMEM53-208ENST00000476724 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
TMEM53-208ENST00000476724 CYP2G1PQ6ZSU1 146 aa13.57□□□□□ -0.24
TMEM53-208ENST00000476724 Q8TCH9 128 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms