RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TNXAQ16473 311 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 OR2B11Q5JQS5 317 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 TMEM69Q5SWH9 247 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 ZNF66Q6ZN08 573 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 IDO2Q6ZQW0 420 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 MFSD4AQ8N468 514 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 OR13F1Q8NGS4 319 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 SECTM1Q8WVN6 248 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 TCTEX1D2Q8WW35 142 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 GIMAP1Q8WWP7 306 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 SNAPC3Q92966 411 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
CKS1B-206ENST00000474215 PHB2Q99623 299 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 CCL28Q9NRJ3 127 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 TAS2R8Q9NYW2 309 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 A0A087WW49 117 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 C13orf42A0A1B0GVH6 325 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 MEIS3P1A6NDR6 274 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 CREBL2O60519 120 aaPredicted RBP8.63□□□□□ -1.03
CKS1B-206ENST00000474215 ACTL6BO94805 426 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 PPYP01298 95 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 SAA1P0DJI8 122 aaPredicted RBP8.63□□□□□ -1.03
CKS1B-206ENST00000474215 ECI1P42126 302 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 SLURP1P55000 103 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 BRWD1-AS2P59051 145 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 TAS2R20P59543 309 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 ZNF429Q86V71 674 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 MMD2Q8IY49 270 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 ZBTB34Q8NCN2 500 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 OR4S2Q8NH73 311 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 SRSF12Q8WXF0 261 aaKnown RBP8.63□□□□□ -1.03
CKS1B-206ENST00000474215 ACOT12Q8WYK0 555 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 TINAGL1Q9GZM7 467 aaPredicted RBP8.63□□□□□ -1.03
CKS1B-206ENST00000474215 SLC5A7Q9GZV3 580 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 ZNF430Q9H8G1 570 aaPredicted RBP8.63□□□□□ -1.03
CKS1B-206ENST00000474215 IFT46Q9NQC8 304 aa8.63□□□□□ -1.03
CKS1B-206ENST00000474215 SMIM31A0A1B0GVY4 71 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 APOA1P02647 267 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 OR9G9P0C7N8 305 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 APELAP0DMC3 54 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 PRSS3P35030 304 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 KIR2DS2P43631 304 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 DCTN2Q13561 401 aaKnown RBP8.62□□□□□ -1.03
CKS1B-206ENST00000474215 DHRS11Q6UWP2 260 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 VKORC1L1Q8N0U8 176 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 VSTM2AQ8TAG5 236 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 CMTM3Q96MX0 182 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 GPHA2Q96T91 129 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 SPIN2AQ99865 258 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 SPIN2BQ9BPZ2 258 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 RANGRFQ9HD47 186 aaPredicted RBP8.62□□□□□ -1.03
CKS1B-206ENST00000474215 COA4Q9NYJ1 87 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 COMMD3Q9UBI1 195 aa8.62□□□□□ -1.03
CKS1B-206ENST00000474215 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 DNAH3Q8TD57 4116 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 MPPED1O15442 326 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 TNFSF12O43508 249 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 OR2A4O95047 310 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 HRASP01112 189 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 EIF4EP06730 217 aaKnown RBP8.61□□□□□ -1.03
CKS1B-206ENST00000474215 SMIM18P0DKX4 95 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 NAT1P18440 290 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 RFX2P48378 723 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 RORCP51449 518 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 FXYD4P59646 89 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 DYRK1AQ13627 763 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 PUSL1Q8N0Z8 303 aaKnown RBP8.61□□□□□ -1.03
CKS1B-206ENST00000474215 ADAD2Q8NCV1 583 aaKnown RBP8.61□□□□□ -1.03
CKS1B-206ENST00000474215 TMEM167AQ8TBQ9 72 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 USMG5Q96IX5 58 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 OR2A7Q96R45 310 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 PRR25Q96S07 402 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 AIFM2Q9BRQ8 373 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 EHFQ9NZC4 300 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 ANAPC10Q9UM13 185 aa8.61□□□□□ -1.03
CKS1B-206ENST00000474215 ZNF256Q9Y2P7 627 aaPredicted RBP8.61□□□□□ -1.03
CKS1B-206ENST00000474215 ANKRD34BA5PLL1 514 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 SULT1C2O00338 296 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 RBFOX2O43251 390 aaKnown RBP eCLIP8.6□□□□□ -1.03
CKS1B-206ENST00000474215 SAP30O75446 220 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 KBTBD11O94819 623 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 PMP2P02689 132 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 ZP3P21754 424 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 MAS1LP35410 378 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 TAS2R46P59540 309 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 HERV-K104P61576 105 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 CATR1Q13166 79 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 CTF1Q16619 201 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 C10orf55Q5SWW7 151 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 ZNF343Q6P1L6 599 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 ACSM6Q6P461 480 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 ZNF818PQ6ZRF7 136 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 ANKRD13BQ86YJ7 626 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 LYSMD2Q8IV50 215 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 SPAG16Q8N0X2 631 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 TTC9CQ8N5M4 171 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 OR5H2Q8NGV7 314 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 BORCS5Q969J3 196 aa8.6□□□□□ -1.03
CKS1B-206ENST00000474215 B9D2Q9BPU9 175 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 263.6 ms