RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SEC11BP0C7V7 166 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 PI3P19957 117 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 UBE2KP61086 200 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 SUPT4H1P63272 117 aaKnown RBP12.31□□□□□ -0.44
LMNA-213ENST00000473598 ETFRF1Q6IPR1 90 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 ZNF343Q6P1L6 599 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 OR1P1Q8NH06 330 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 RNASE8Q8TDE3 154 aaKnown RBP12.31□□□□□ -0.44
LMNA-213ENST00000473598 TMEM106BQ9NUM4 274 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 POLQO75417 2590 aa12.31□□□□□ -0.44
LMNA-213ENST00000473598 IGHV1-69-2A0A0G2JMI3 117 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 ZNF727A8MUV8 499 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 H3BQ15 152 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 TMEM178BH3BS89 294 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 OR13C7P0DN81 318 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 ECI1P42126 302 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 SRSF7Q16629 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
LMNA-213ENST00000473598 TEX36Q5VZQ5 186 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 LEMD1Q68G75 181 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 BTNL3Q6UXE8 466 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 PLPPR1Q8TBJ4 325 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 MRPL30Q8TCC3 161 aaKnown RBP12.3□□□□□ -0.44
LMNA-213ENST00000473598 CCL17Q92583 94 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 UBTD1Q9HAC8 227 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 TRBV6-6A0A0A6YYG2 114 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 ZNF205O95201 554 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 BRS3P32247 399 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 CAMLGP49069 296 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 KRTAP10-9P60411 292 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 STUMQ69YW2 141 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 ZNF497Q6ZNH5 498 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 Q6ZS49 121 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 SSX7Q7RTT5 188 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 GAPTQ8N292 157 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 ZNF2Q9BSG1 426 aaPredicted RBP12.3□□□□□ -0.44
LMNA-213ENST00000473598 RAB1BQ9H0U4 201 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 ZNF286AQ9HBT8 521 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 Q9N2K0 584 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 LAMP3Q9UQV4 416 aa12.3□□□□□ -0.44
LMNA-213ENST00000473598 AKAP6Q13023 2319 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 OR5H8P0DN80 308 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 GABRA2P47869 451 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 SELENOTP62341 195 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 TEX38Q6PEX7 206 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 SNX22Q96L94 193 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 C2orf50Q96LR7 162 aa12.29□□□□□ -0.44
LMNA-213ENST00000473598 ZNF737O75373 536 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 PPBPP02775 128 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 RND2P52198 227 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 ZNF880Q6PDB4 577 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 TVP23CQ96ET8 276 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 LIME1Q9H400 295 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 NECAP2Q9NVZ3 263 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 TMEM242Q9NWH2 141 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 PPIAL4EA0A075B759 164 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 PPIAL4DF5H284 164 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 PPIAL4FP0DN26 164 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 SLC9A3R2Q15599 337 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 ANKRD55Q3KP44 614 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 SLC35E3Q7Z769 313 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 DEFB108BQ8NET1 73 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 PPIAL4AQ9Y536 164 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 SPG11Q96JI7 2443 aa12.28□□□□□ -0.44
LMNA-213ENST00000473598 TRAV38-1A0A0B4J264 116 aa12.27□□□□□ -0.44
LMNA-213ENST00000473598 IL15RAQ13261 267 aa12.27□□□□□ -0.44
LMNA-213ENST00000473598 SLC35E4Q6ICL7 350 aa12.27□□□□□ -0.44
LMNA-213ENST00000473598 NEU4Q8WWR8 484 aaPredicted RBP12.27□□□□□ -0.44
LMNA-213ENST00000473598 NRGNQ92686 78 aa12.27□□□□□ -0.44
LMNA-213ENST00000473598 SDSLQ96GA7 329 aa12.27□□□□□ -0.44
LMNA-213ENST00000473598 FBXL17Q9UF56 701 aa12.27□□□□□ -0.44
LMNA-213ENST00000473598 C14orf166Q9Y224 244 aaKnown RBP12.27□□□□□ -0.44
LMNA-213ENST00000473598 KIAA2026Q5HYC2 2103 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 TRBV24-1A0A075B6N3 115 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 KIR2DS1A0A191URI9 304 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 NKX6-3A6NJ46 265 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 CYSRT1A8MQ03 144 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 NDUFS8O00217 210 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 HSD17B6O14756 317 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 GYPAP02724 150 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 CTSDP07339 412 aaPredicted RBP12.27□□□□□ -0.45
LMNA-213ENST00000473598 COL8A2P25067 703 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 KIR2DS4P43632 304 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 PDLIM4P50479 330 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 AESQ08117 197 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 KIR2DS1Q14954 304 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 TMEM241Q24JQ0 296 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 COL5A1-AS1Q5SY13 56 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 ZNF788Q6ZQV5 615 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 ZNRF1Q8ND25 227 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 PPP1R35Q8TAP8 253 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 TMEM18Q96B42 140 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 COQ2Q96H96 371 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 ACY3Q96HD9 319 aa12.27□□□□□ -0.45
LMNA-213ENST00000473598 ZNF665Q9H7R5 613 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms