RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 RRASP10301 218 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 SYNJ2BPP57105 145 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 GNG2P59768 71 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 VMA21Q3ZAQ7 101 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 ZNF343Q6P1L6 599 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 Q8N1Y9 231 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 ADTRPQ96IZ2 230 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 DCUN1D5Q9BTE7 237 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 ANXA10Q9UJ72 324 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 SPATA2Q9UM82 520 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 SORL1Q92673 2214 aa12.73□□□□□ -0.37
USP40-212ENST00000473191 A0A1B0GW64 132 aa12.72□□□□□ -0.37
USP40-212ENST00000473191 HMX3A6NHT5 357 aa12.72□□□□□ -0.37
USP40-212ENST00000473191 MYOD1P15172 320 aa12.72□□□□□ -0.37
USP40-212ENST00000473191 CBX3Q13185 183 aa12.72□□□□□ -0.37
USP40-212ENST00000473191 IDNKQ5T6J7 187 aa12.72□□□□□ -0.37
USP40-212ENST00000473191 CNIH2Q6PI25 160 aa12.72□□□□□ -0.37
USP40-212ENST00000473191 OSR1Q8TAX0 266 aaPredicted RBP12.72□□□□□ -0.37
USP40-212ENST00000473191 YTHDF1Q9BYJ9 559 aaKnown RBP12.72□□□□□ -0.37
USP40-212ENST00000473191 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
USP40-212ENST00000473191 PEF1Q9UBV8 284 aaKnown RBP12.72□□□□□ -0.37
USP40-212ENST00000473191 TRAV18A0A075B6X5 111 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 A0A0G2JLM5 398 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 TNFSF12O43508 249 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 BRI3O95415 125 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 OR9G9P0C7N8 305 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 CD36P16671 472 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 EDN2P20800 178 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 ARL6IP1Q15041 203 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 CDK10Q15131 360 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 OR9G4Q8NGQ1 327 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 TMEM68Q96MH6 324 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 Q9H521 79 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 AKIP1Q9NQ31 210 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 TAS2R8Q9NYW2 309 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 TNCP24821 2201 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 DNAH7Q8WXX0 4024 aa12.71□□□□□ -0.37
USP40-212ENST00000473191 IZUMO1RA6ND01 250 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 MEIS3P1A6NDR6 274 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 CSN3P07498 182 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 CTXN2P0C2S0 81 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 ZP3P21754 424 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 AADACP22760 399 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 RHOGP84095 191 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 CCL28Q9NRJ3 127 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 NBEAL2Q6ZNJ1 2754 aa12.7□□□□□ -0.38
USP40-212ENST00000473191 TEX22C9J3V5 150 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 BMPR1BO00238 502 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 MPPED1O15442 326 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 IGHV4-30-4P0DP06 118 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 ADAMTSL5Q6ZMM2 481 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 ANKRD13BQ86YJ7 626 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 MFSD4AQ8N468 514 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 BEST4Q8NFU0 473 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 TCTEX1D2Q8WW35 142 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 SNAPC3Q92966 411 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 ELOVL1Q9BW60 279 aa12.69□□□□□ -0.38
USP40-212ENST00000473191 TRBV9A0A0B4J1U6 114 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 OR2J3O76001 311 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 IL6RP08887 468 aaPredicted RBP12.68□□□□□ -0.38
USP40-212ENST00000473191 FCGR2CP31995 323 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 SSX9Q7RTT3 188 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 PUSL1Q8N0Z8 303 aaKnown RBP12.68□□□□□ -0.38
USP40-212ENST00000473191 TTC9CQ8N5M4 171 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 SECTM1Q8WVN6 248 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 USMG5Q96IX5 58 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 DMRT1Q9Y5R6 373 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 SELENOKQ9Y6D0 94 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 S4R3C0 116 aa12.68□□□□□ -0.38
USP40-212ENST00000473191 CGB1A6NKQ9 187 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 PPP5D1E7EU14 171 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 SCGNO76038 276 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 KBTBD11O94819 623 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 IGHV3-23P01764 117 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 HLA-AP01891 365 aaKnown RBP12.67□□□□□ -0.38
USP40-212ENST00000473191 EXOSC2Q13868 293 aaKnown RBP12.67□□□□□ -0.38
USP40-212ENST00000473191 HOGA1Q86XE5 327 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 MMD2Q8IY49 270 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 OR13F1Q8NGS4 319 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 THAP7Q9BT49 309 aaPredicted RBP12.67□□□□□ -0.38
USP40-212ENST00000473191 AUNIPQ9H7T9 357 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 PRELID3BQ9Y3B1 194 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 ETV7Q9Y603 341 aa12.67□□□□□ -0.38
USP40-212ENST00000473191 OR2A4O95047 310 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 AREGP15514 252 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 ARPC4P59998 168 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 LSM3P62310 102 aaKnown RBP12.66□□□□□ -0.38
USP40-212ENST00000473191 RPEL1Q2QD12 228 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 KCTD21Q4G0X4 260 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 OR4S2Q8NH73 311 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 FYTTD1Q96QD9 318 aaKnown RBP12.66□□□□□ -0.38
USP40-212ENST00000473191 OR2A7Q96R45 310 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 HSD17B10Q99714 261 aaKnown RBP12.66□□□□□ -0.38
USP40-212ENST00000473191 C19orf73Q9NVV2 129 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 MRPS7Q9Y2R9 242 aaKnown RBP12.66□□□□□ -0.38
USP40-212ENST00000473191 TENM3Q9P273 2699 aa12.66□□□□□ -0.38
USP40-212ENST00000473191 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.65□□□□□ -0.38
USP40-212ENST00000473191 TRAV3A0A0B4J244 114 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms