RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 LINC00312Q9Y6C7 94 aa6.31□□□□□ -1.4
CCDC171-205ENST00000472806 PPIAL4EA0A075B759 164 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 MAP1LC3B2A6NCE7 125 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 CXorf65A6NEN9 183 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 PPIAL4DF5H284 164 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 NDUFA2O43678 99 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 IFNA10P01566 189 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 TFF1P04155 84 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 OR4A8P0C604 315 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 PPIAL4FP0DN26 164 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 NFYBP25208 207 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 CCKARP32238 428 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 PSMB3P49720 205 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 RAB13P51153 203 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 CCL20P78556 96 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 DLK1P80370 383 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 MRPS11P82912 194 aaKnown RBP6.3□□□□□ -1.4
CCDC171-205ENST00000472806 ARL16Q0P5N6 197 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 ICAM4Q14773 271 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 POU2AF1Q16633 256 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 RTL8BQ17RB0 113 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 C17orf58Q2M2W7 97 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 FAM71F2Q6NXP2 309 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 HAPLN4Q86UW8 402 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 RXFP4Q8TDU9 374 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 LHX4Q969G2 390 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 DCTN5Q9BTE1 182 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 MAP1LC3BQ9GZQ8 125 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 MS4A5Q9H3V2 200 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 SAP30LQ9HAJ7 183 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 HEYLQ9NQ87 328 aaPredicted RBP6.3□□□□□ -1.4
CCDC171-205ENST00000472806 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 FKBP11Q9NYL4 201 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 GNG13Q9P2W3 67 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 PRNDQ9UKY0 176 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 MSRB2Q9Y3D2 182 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 PPIAL4AQ9Y536 164 aa6.3□□□□□ -1.4
CCDC171-205ENST00000472806 PUS1Q9Y606 427 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCDC171-205ENST00000472806 MED19A0JLT2 244 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 SMCO3A2RU48 225 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 DPRXA6NFQ7 191 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 C15orf61A6NNL5 157 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 COLCA2A8K830 154 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 PMS2P5A8MQ11 134 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 FNDC10F2Z333 226 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 H3BQ15 152 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 TGOLN2O43493 480 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 NDUFB3O43676 98 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 CYB5R3P00387 301 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 APOA2P02652 100 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 GYPAP02724 150 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 IFNA4P05014 189 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 ARG1P05089 322 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 OR9G9P0C7N8 305 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 NDUFB7P17568 137 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 CD1BP29016 333 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 HOXA1P49639 335 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 ELLP55199 621 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 BRWD1-AS2P59051 145 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 TLE1Q04724 770 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 BSPH1Q075Z2 132 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 CHD3Q12873 2000 aaKnown RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 RAB31Q13636 194 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 ADIPOQQ15848 244 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 SMUG1Q53HV7 270 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 LRRC10Q5BKY1 277 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 FFAR4Q5NUL3 377 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 LCN15Q6UWW0 184 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 ETV3LQ6ZN32 361 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 LYG1Q8N1E2 194 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 Q8NA96 180 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 OR10G9Q8NGN4 311 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 OR10G7Q8NGN6 311 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 DDB2Q92466 427 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 SNRNP40Q96DI7 357 aaKnown RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 MALSU1Q96EH3 234 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 NEIL1Q96FI4 390 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 CCL13Q99616 98 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 RARRES2Q99969 163 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 SCNM1Q9BWG6 230 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 QTRT1Q9BXR0 403 aaKnown RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 NPCDR1Q9BY65 106 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 DYNLRB1Q9NP97 96 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 SLC25A10Q9UBX3 287 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 FOXA2Q9Y261 457 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-205ENST00000472806 WDR83OSQ9Y284 106 aa6.29□□□□□ -1.4
CCDC171-205ENST00000472806 INTS1Q8N201 2190 aaKnown RBP6.28□□□□□ -1.4
CCDC171-205ENST00000472806 CACNA1HO95180 2353 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 SAA2-SAA4A0A096LPE2 208 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 ZFP92A6NM28 416 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 C15orf62A8K5M9 175 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 B9A039 149 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 TMEM250H0YL14 139 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 OR2C1O95371 312 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 CRYBA1P05813 215 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 S100A6P06703 90 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 CD3EP07766 207 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 SAA2P0DJI9 122 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms