RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 WFDC10AQ9H1F0 79 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 VCXQ9H320 206 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 TXNL4BQ9NX01 149 aaKnown RBP6.13□□□□□ -1.43
USP48-207ENST00000471752 COA4Q9NYJ1 87 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 ZMAT5Q9UDW3 170 aaKnown RBP6.13□□□□□ -1.43
USP48-207ENST00000471752 TRAV3A0A0B4J244 114 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 CGB1A6NKQ9 187 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 ZNF785A8K8V0 405 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 TEX22C9J3V5 150 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 FCGR3BO75015 233 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 TUSC2O75896 110 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 NDUFB8O95169 186 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 SPDEFO95238 335 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 HLA-DQB1P01920 261 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 SAA1P0DJI8 122 aaPredicted RBP6.12□□□□□ -1.43
USP48-207ENST00000471752 SDC2P34741 201 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 UBE2KP61086 200 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 RHOGP84095 191 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 ARFRP1Q13795 201 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 HAGHQ16775 308 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 UBE2UQ5VVX9 321 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 TCTEX1D1Q8N7M0 179 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.12□□□□□ -1.43
USP48-207ENST00000471752 OR9G4Q8NGQ1 327 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 SRSF12Q8WXF0 261 aaKnown RBP6.12□□□□□ -1.43
USP48-207ENST00000471752 TM2D3Q9BRN9 247 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 GINS4Q9BRT9 223 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 GHITMQ9H3K2 345 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 SLA2Q9H6Q3 261 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 EDA2RQ9HAV5 297 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 RANGRFQ9HD47 186 aaPredicted RBP6.12□□□□□ -1.43
USP48-207ENST00000471752 PEF1Q9UBV8 284 aaKnown RBP6.12□□□□□ -1.43
USP48-207ENST00000471752 DAPK2Q9UIK4 370 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 MGAT4AQ9UM21 535 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 FRAS1Q86XX4 4008 aa6.12□□□□□ -1.43
USP48-207ENST00000471752 TRBV9A0A0B4J1U6 114 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 C3orf84H3BNL1 204 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 PDCD5O14737 125 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 TNFSF12O43508 249 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 OR2J3O76001 311 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 OR2C1O95371 312 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 REG1AP05451 166 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 AREGP15514 252 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 RAB6AP20340 208 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 PSMA1P25786 263 aaKnown RBP6.11□□□□□ -1.43
USP48-207ENST00000471752 PSMB9P28065 219 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 MXD1Q05195 221 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 HACD4Q5VWC8 232 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 PYHIN1Q6K0P9 492 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 Q6ZS49 121 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 ANKRD13BQ86YJ7 626 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 TEX45Q8NA69 505 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 OR6Q1Q8NGQ2 317 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 LGALS14Q8TCE9 139 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 CACNG8Q8WXS5 425 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 ACOT12Q8WYK0 555 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 SLC25A38Q96DW6 304 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 FANCD2OSQ96PS1 177 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 FAM110AQ9BQ89 295 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 CCL28Q9NRJ3 127 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 SPATA2Q9UM82 520 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 STUB1Q9UNE7 303 aa6.11□□□□□ -1.43
USP48-207ENST00000471752 RBMX2Q9Y388 322 aaKnown RBP6.11□□□□□ -1.43
USP48-207ENST00000471752 RRP15Q9Y3B9 282 aaKnown RBP6.11□□□□□ -1.43
USP48-207ENST00000471752 RBM7Q9Y580 266 aaKnown RBP6.11□□□□□ -1.43
USP48-207ENST00000471752 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 TRAV18A0A075B6X5 111 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 RBMY1BA6NDE4 496 aaKnown RBP6.1□□□□□ -1.43
USP48-207ENST00000471752 MEIS3P1A6NDR6 274 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 RBMY1EA6NEQ0 496 aaKnown RBP6.1□□□□□ -1.43
USP48-207ENST00000471752 NOTOA8MTQ0 251 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 ATP6V1G2O95670 118 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 CD7P09564 240 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 OR9G9P0C7N8 305 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 RBMY1DP0C7P1 496 aaKnown RBP6.1□□□□□ -1.43
USP48-207ENST00000471752 RPA2P15927 270 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 AADACP22760 399 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 GADD45AP24522 165 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 TALDO1P37837 337 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 SERPINB10P48595 397 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 PSMD7P51665 324 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 MRPS15P82914 257 aaKnown RBP6.1□□□□□ -1.43
USP48-207ENST00000471752 DCTN2Q13561 401 aaKnown RBP6.1□□□□□ -1.43
USP48-207ENST00000471752 CD300EQ496F6 205 aaPredicted RBP6.1□□□□□ -1.43
USP48-207ENST00000471752 SSX9Q7RTT3 188 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 MFSD4AQ8N468 514 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 TTC9CQ8N5M4 171 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 DEFB125Q8N687 156 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 CITED4Q96RK1 184 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 PHB2Q99623 299 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 DCUN1D5Q9BTE7 237 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 CENPOQ9BU64 300 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 ELOVL1Q9BW60 279 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 PLEKHA3Q9HB20 300 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 ZC4H2Q9NQZ6 224 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 TAS2R8Q9NYW2 309 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 RAB26Q9ULW5 256 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 OR2W1Q9Y3N9 320 aa6.1□□□□□ -1.43
USP48-207ENST00000471752 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms