RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ITGB1BP1O14713 200 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 MPZL2O60487 215 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 CST4P01036 141 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 CCL5P13501 91 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 NQO2P16083 231 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 F8A1P23610 371 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 AP1S1P61966 158 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 CDK10Q15131 360 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 C9orf64Q5T6V5 341 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 GPHB5Q86YW7 130 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 C12orf29Q8N999 325 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 OR8B3Q8NGG8 313 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 OR4C6Q8NH72 309 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 ASB13Q8WXK3 278 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 AQP3Q92482 292 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 PPWD1Q96BP3 646 aaKnown RBP-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 TLCD1Q96CP7 247 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 ZFP30Q9Y2G7 519 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 SYNRGQ9UMZ2 1314 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 ALPK2Q86TB3 2170 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 A0A087WX48 190 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 TRAV14DV4A0A0A6YYC5 116 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 TRAV8-1A0A0A6YYK1 113 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 C9JCJ5 164 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 F5H5K5 113 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 SULT1C2O00338 296 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 TNFAIP8O95379 198 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 ALDH3A1P30838 453 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 RUNX1Q01196 453 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 MGAT3Q09327 533 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 SAPCD1Q5SSQ6 148 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 SPATA24Q86W54 205 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 C17orf78Q8N4C9 275 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 RPP25LQ8N5L8 163 aaKnown RBP-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 SGMS2Q8NHU3 365 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 C12orf43Q96C57 262 aaKnown RBP-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 SERPINI1Q99574 410 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 TMEM208Q9BTX3 173 aa-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 TNRC6AQ8NDV7 1962 aaKnown RBP-0.21□□□□□ -2.44
PRPF40A-207ENST00000471701 CACNA1EQ15878 2313 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 CNTRLQ7Z7A1 2325 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 LOC110117498A0A087WWA1 95 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 GOLGA8RI6L899 631 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 ATP5G1P05496 136 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 TPM2P07951 284 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 SNAP25P60880 206 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 TNNC1P63316 161 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 TMEM249Q2WGJ8 235 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 RASSF6Q6ZTQ3 369 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 DHFR2Q86XF0 187 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 CCDC12Q8WUD4 166 aaPredicted RBP-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 MS4A6EQ96DS6 147 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 RABL2AQ9UBK7 228 aaPredicted RBP-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 POFUT2Q9Y2G5 429 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 MED12LQ86YW9 2145 aa-0.22□□□□□ -2.44
PRPF40A-207ENST00000471701 NUP160Q12769 1436 aa-0.22□□□□□ -2.45
PRPF40A-207ENST00000471701 TMEM269A0A1B0GVZ9 245 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 IRGMA1A4Y4 181 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 SDCBPO00560 298 aaPredicted RBP-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 COCHO43405 550 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 DLX6P56179 175 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 H2BFSP57053 126 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 RAB8AP61006 207 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 FKBP1AP62942 108 aaKnown RBP-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 GNA13Q14344 377 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 EXOC3L4Q17RC7 722 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 RAB2BQ8WUD1 216 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 ACOT12Q8WYK0 555 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 ZNHIT6Q9NWK9 470 aaKnown RBP-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 HDGFL3Q9Y3E1 203 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 TIMM22Q9Y584 194 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 MEGF8Q7Z7M0 2845 aa-0.23□□□□□ -2.45
PRPF40A-207ENST00000471701 LIN7AO14910 233 aaPredicted RBP-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 ATP8B1O43520 1251 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 SYNGR1O43759 233 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 HLA-DQB2P05538 268 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 GP1BAP07359 652 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 SLC35E2BP0CK96 405 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 CFL1P23528 166 aaKnown RBP-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 MSNP26038 577 aaKnown RBP-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 HPCAP84074 193 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 SRSF6Q13247 344 aaKnown RBP-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 ZNF345Q14585 488 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 ZNF846Q147U1 533 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 PDPK2PQ6A1A2 396 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 C1orf158Q8N1D5 194 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 DYNC2LI1Q8TCX1 351 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 RNASEH2CQ8TDP1 164 aaKnown RBP-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 RORBQ92753 470 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 LRRC45Q96CN5 670 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 LINC00526Q96FQ7 95 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 SERPINB11Q96P15 392 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 OR5AC2Q9NZP5 309 aa-0.24□□□□□ -2.45
PRPF40A-207ENST00000471701 TMED7-TICAM2A0A0A6YYA0 188 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 ADAP1O75689 374 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 MT-CO2P00403 227 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 HIST1H1CP16403 213 aaKnown RBP-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 CXCL2P19875 107 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 LCN1P31025 176 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms