RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 POMPQ9Y244 141 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 UFC1Q9Y3C8 167 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 GMPPBQ9Y5P6 360 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 IGHV3-49A0A0A0MS15 119 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 TRAV10A0A0B4J240 114 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 CREBL2O60519 120 aaPredicted RBP5.04□□□□□ -1.6
HDAC1-204ENST00000471488 DHFRP00374 187 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 IFNA21P01568 189 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 IFNA17P01571 189 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 P0DMU3 169 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 FAM231AP0DMU4 169 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 FAM231CP0DMU5 169 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 IGFBP3P17936 291 aaPredicted RBP5.04□□□□□ -1.6
HDAC1-204ENST00000471488 HTR2CP28335 458 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 PSMD7P51665 324 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 UBE2KP61086 200 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 MRPS15P82914 257 aaKnown RBP5.04□□□□□ -1.6
HDAC1-204ENST00000471488 TMEM187Q14656 261 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 Q499Y3 187 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 SOHLH1Q5JUK2 328 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 PVRIGQ6DKI7 326 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 MOB1BQ7L9L4 216 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 VKORC1L1Q8N0U8 176 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 GBGT1Q8N5D6 347 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 TTC9CQ8N5M4 171 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 POM121L12Q8N7R1 296 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 TEX45Q8NA69 505 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 MARC2Q969Z3 335 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 TMEM59Q9BXS4 323 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 C11orf68Q9H3H3 251 aaKnown RBP5.04□□□□□ -1.6
HDAC1-204ENST00000471488 SCRT2Q9NQ03 307 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF446Q9NWS9 450 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 SDHAF2Q9NX18 166 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 AP4S1Q9Y587 144 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 DMRT1Q9Y5R6 373 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 DNAH6Q9C0G6 4158 aa5.04□□□□□ -1.6
HDAC1-204ENST00000471488 IGHV3-21A0A0B4J1V1 117 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 MFSD2BA6NFX1 497 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 A8MWP6 167 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 FCGR3BO75015 233 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 CTSDP07339 412 aaPredicted RBP5.03□□□□□ -1.6
HDAC1-204ENST00000471488 LIMS3P0CW19 117 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 LIMS4P0CW20 117 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 SAA1P0DJI8 122 aaPredicted RBP5.03□□□□□ -1.6
HDAC1-204ENST00000471488 RRASP10301 218 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 MYOD1P15172 320 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 AREGP15514 252 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 MYL12AP19105 171 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 RPL27AP46776 148 aaKnown RBP5.03□□□□□ -1.6
HDAC1-204ENST00000471488 ETV1P50549 477 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 PLA2G7Q13093 441 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 TPBGQ13641 420 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 RBMY1FQ15415 496 aaKnown RBP5.03□□□□□ -1.6
HDAC1-204ENST00000471488 DNAL1Q4LDG9 190 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 CCDC58Q4VC31 144 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 MMD2Q8IY49 270 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 UBAC2Q8NBM4 344 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 SETD9Q8NE22 299 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 OR10J5Q8NHC4 309 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 GIMAP1Q8WWP7 306 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 SMIM19Q96E16 107 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 Q96MT0 163 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 GINS4Q9BRT9 223 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 RIMS4Q9H426 269 aaPredicted RBP5.03□□□□□ -1.6
HDAC1-204ENST00000471488 C5orf66Q9H5L9 145 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF257Q9Y2Q1 563 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 RPL36Q9Y3U8 105 aaKnown RBP5.03□□□□□ -1.6
HDAC1-204ENST00000471488 DNAH2Q9P225 4427 aa5.03□□□□□ -1.6
HDAC1-204ENST00000471488 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 DEFB131BA0A096LNP1 70 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 TRBV7-1A0A0A6YYK4 115 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 IGHV4-28A0A0C4DH34 117 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 OR2T8A6NH00 312 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 EI24O14681 340 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 ITGB1BP1O14713 200 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 TSPAN4O14817 238 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 SOCS1O15524 211 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 NAPSAO96009 420 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 FCGR1AP12314 374 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 RPS27AP62979 156 aaKnown RBP5.02□□□□□ -1.61
HDAC1-204ENST00000471488 CDK10Q15131 360 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 MRGPRG-AS1Q2M3A8 158 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 YIF1BQ5BJH7 314 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 IGSF11Q5DX21 431 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 LEMD1Q68G75 181 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 SSX9Q7RTT3 188 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.02□□□□□ -1.61
HDAC1-204ENST00000471488 CCDC197Q8NCU1 140 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 MAFIPQ8WZ33 124 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 CXorf58Q96LI9 332 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 CMSS1Q9BQ75 279 aaKnown RBP5.02□□□□□ -1.61
HDAC1-204ENST00000471488 NDUFAF3Q9BU61 184 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 C12orf4Q9NQ89 552 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 BABAM2Q9NXR7 383 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 MGAT4AQ9UM21 535 aa5.02□□□□□ -1.61
HDAC1-204ENST00000471488 A0A075B6Q4 140 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 IGHV3OR16-13A0A075B7E8 117 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 IGHV3-74A0A0B4J1X5 117 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 IGKV1-6A0A0C4DH72 117 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 TRBV5-5A0A0J9YX44 114 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms