RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 OR10P1Q8NGE3 313 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 OR1F12Q8NHA8 337 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
SHANK2-214ENST00000468619 EP300Q09472 2414 aaPredicted RBP11.25□□□□□ -0.61
SHANK2-214ENST00000468619 OR5B21A6NL26 309 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 NPIPA3F8WFD2 350 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 CD59P13987 128 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 ST6GALNAC6Q969X2 333 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 STRADBQ9C0K7 418 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
SHANK2-214ENST00000468619 hCG_38984A0A1B0GV85 526 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 A0A1W2PPV4 95 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 ZNF891A8MT65 544 aaPredicted RBP11.24□□□□□ -0.61
SHANK2-214ENST00000468619 PRR33A8MZF0 331 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 ACP1P24666 158 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 SRIP30626 198 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 RIPPLY3P57055 190 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 Q8NFD4 153 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 TMEM54Q969K7 222 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 DMXL1Q9Y485 3027 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 COL27A1Q8IZC6 1860 aaPredicted RBP11.24□□□□□ -0.61
SHANK2-214ENST00000468619 S1PR2O95136 353 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 CCL4P13236 92 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 ZNF32P17041 273 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 COL8A2P25067 703 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 OTX2P32243 289 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 Q56UQ5 140 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 SLC25A53Q5H9E4 307 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 FAM58AQ8N1B3 248 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 SFXN3Q9BWM7 321 aa11.24□□□□□ -0.61
SHANK2-214ENST00000468619 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
SHANK2-214ENST00000468619 COL5A1P20908 1838 aaPredicted RBP11.24□□□□□ -0.61
SHANK2-214ENST00000468619 OR2T8A6NH00 312 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 RNF212BA8MTL3 300 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 ZG16O60844 167 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 B4GALT1P15291 398 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 IGLL1P15814 213 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 PTGDSP41222 190 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 ARF1P84077 181 aaKnown RBP11.23□□□□□ -0.61
SHANK2-214ENST00000468619 RPEL1Q2QD12 228 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 MPV17L2Q567V2 206 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 FAM27BQ5VT28 67 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 PRAMEF20Q5VT98 475 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 VASH2Q86V25 355 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 OR5A2Q8NGI9 324 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 FREM2Q5SZK8 3169 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 TNFSF11O14788 317 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 ARL14EPLP0DKL9 152 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 GPM6AP51674 278 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 TCL1AP56279 114 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 CLDN15P56746 228 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 MUC15Q8N387 334 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 OR2M7Q8NG81 312 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 TSKUQ8WUA8 353 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 SDK2Q58EX2 2172 aa11.23□□□□□ -0.61
SHANK2-214ENST00000468619 PMS2P5A8MQ11 134 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 GABRA2P47869 451 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 TRIP6Q15654 476 aaKnown RBP11.22□□□□□ -0.61
SHANK2-214ENST00000468619 RAET1LQ5VY80 246 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 PRR27Q6MZM9 219 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 ZNF488Q96MN9 340 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 GNB1LQ9BYB4 327 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 CDC42EP3Q9UKI2 254 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 CIDEAO60543 219 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 G6PCP35575 357 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 RHOGP84095 191 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 TCF15Q12870 199 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 SRSF7Q16629 238 aaKnown RBP eCLIP11.22□□□□□ -0.615e-8■■■■□ 20.3
SHANK2-214ENST00000468619 OR5B3Q8NH48 314 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 AKIRIN1Q9H9L7 192 aaPredicted RBP11.22□□□□□ -0.61
SHANK2-214ENST00000468619 DEPPQ9NTK1 212 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 MTCH1Q9NZJ7 389 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 CRIM1Q9NZV1 1036 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 CELSR3Q9NYQ7 3312 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 PIGBOS1A0A0B4J2F0 54 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 C17orf112F2Z3M2 114 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 CLDN14O95500 239 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 FGF12P61328 243 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 RPL31P62899 125 aaKnown RBP11.22□□□□□ -0.61
SHANK2-214ENST00000468619 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 PRSS33Q8NF86 280 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 FGFBP3Q8TAT2 258 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 NEUROG1Q92886 237 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 ZC2HC1AQ96GY0 325 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 WASHC3Q9Y3C0 194 aa11.22□□□□□ -0.61
SHANK2-214ENST00000468619 TAX1BP3O14907 124 aa11.21□□□□□ -0.61
SHANK2-214ENST00000468619 RAMP3O60896 148 aa11.21□□□□□ -0.61
SHANK2-214ENST00000468619 C1orf185Q5T7R7 199 aa11.21□□□□□ -0.61
SHANK2-214ENST00000468619 MRPL54Q6P161 138 aaKnown RBP11.21□□□□□ -0.61
SHANK2-214ENST00000468619 PNKDQ8N490 385 aa11.21□□□□□ -0.61
SHANK2-214ENST00000468619 COL25A1Q9BXS0 654 aaPredicted RBP11.21□□□□□ -0.61
SHANK2-214ENST00000468619 USF3Q68DE3 2245 aa11.21□□□□□ -0.61
SHANK2-214ENST00000468619 CUL9Q8IWT3 2517 aa11.21□□□□□ -0.61
SHANK2-214ENST00000468619 TRAV9-1A0A075B6T8 112 aa11.21□□□□□ -0.62
SHANK2-214ENST00000468619 TRAV9-2A0A087WT02 112 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms