RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MIXL1Q9H2W2 232 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 ELF5Q9UKW6 265 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-207ENST00000467985 IGKV1D-8A0A087WSZ0 117 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 TMEM235A6NFC5 223 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 CRYGBP07316 175 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 DUTP33316 252 aaKnown RBP14.76□□□□□ -0.05
COL7A1-207ENST00000467985 TAS2R20P59543 309 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 VMA21Q3ZAQ7 101 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 VAX1Q5SQQ9 334 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 DCUN1D4Q92564 292 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 C5orf30Q96GV9 206 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 MS4A10Q96PG2 267 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 ALX4Q9H161 411 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-207ENST00000467985 ZNF256Q9Y2P7 627 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-207ENST00000467985 OR2W1Q9Y3N9 320 aa14.76□□□□□ -0.05
COL7A1-207ENST00000467985 TRGV3P03979 118 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 HSPB1P04792 205 aaKnown RBP14.75□□□□□ -0.05
COL7A1-207ENST00000467985 IL18Q14116 193 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 ZNF645Q8N7E2 425 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 TEX45Q8NA69 505 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 POC5Q8NA72 575 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 OSR1Q8TAX0 266 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-207ENST00000467985 NUDCD2Q8WVJ2 157 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 DDB2Q92466 427 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 RHOVQ96L33 236 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 ZNF355PQ9NSJ1 428 aa14.75□□□□□ -0.05
COL7A1-207ENST00000467985 DNAH9Q9NYC9 4486 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 A0A0G2JLM5 398 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 BRI3O95415 125 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 HLA-DQB1P01920 261 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 TNFSF8P32971 234 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 UBE2KP61086 200 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 PJVKQ0ZLH3 352 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 SPANXN2Q5MJ10 180 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 SNX29P2Q8IUI4 249 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 C15orf40Q8WUR7 153 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 DLX4Q92988 240 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-207ENST00000467985 PRR25Q96S07 402 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 AUNIPQ9H7T9 357 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 ANXA10Q9UJ72 324 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 PRELID3BQ9Y3B1 194 aa14.74□□□□□ -0.05
COL7A1-207ENST00000467985 LSM4Q9Y4Z0 139 aaKnown RBP14.74□□□□□ -0.05
COL7A1-207ENST00000467985 IGHV4OR15-8A0A075B7B6 117 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 A0A087WW49 117 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 C13orf42A0A1B0GVH6 325 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 SRRM4A7MD48 611 aaKnown RBP14.73□□□□□ -0.05
COL7A1-207ENST00000467985 LINC00473A8K010 186 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 CREBL2O60519 120 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-207ENST00000467985 SAP30O75446 220 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 CRYZL1O95825 349 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 IGHV3-11P01762 117 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 NHLRC4P0CG21 123 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-207ENST00000467985 SLURP1P55000 103 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 SSBP2P81877 361 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-207ENST00000467985 OR6Q1Q8NGQ2 317 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 RABL2AQ9UBK7 228 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-207ENST00000467985 RABL2BQ9UNT1 228 aa14.73□□□□□ -0.05
COL7A1-207ENST00000467985 SORL1Q92673 2214 aa14.72□□□□□ -0.05
COL7A1-207ENST00000467985 FABP12A6NFH5 140 aa14.72□□□□□ -0.05
COL7A1-207ENST00000467985 SSX5O60225 188 aa14.72□□□□□ -0.05
COL7A1-207ENST00000467985 NFYAP23511 347 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-207ENST00000467985 PRSS3P35030 304 aa14.72□□□□□ -0.05
COL7A1-207ENST00000467985 OR5T1Q8NG75 326 aa14.72□□□□□ -0.05
COL7A1-207ENST00000467985 RANGRFQ9HD47 186 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-207ENST00000467985 IFT46Q9NQC8 304 aa14.72□□□□□ -0.05
COL7A1-207ENST00000467985 STAB2Q8WWQ8 2551 aa14.72□□□□□ -0.05
COL7A1-207ENST00000467985 AADACP22760 399 aa14.71□□□□□ -0.05
COL7A1-207ENST00000467985 PRSS8Q16651 343 aa14.71□□□□□ -0.05
COL7A1-207ENST00000467985 RNASE12Q5GAN4 147 aaKnown RBP14.71□□□□□ -0.05
COL7A1-207ENST00000467985 ACSM6Q6P461 480 aa14.71□□□□□ -0.05
COL7A1-207ENST00000467985 KCTD9Q7L273 389 aa14.71□□□□□ -0.05
COL7A1-207ENST00000467985 PHB2Q99623 299 aa14.71□□□□□ -0.05
COL7A1-207ENST00000467985 HSD17B10Q99714 261 aaKnown RBP14.71□□□□□ -0.05
COL7A1-207ENST00000467985 RBMX2Q9Y388 322 aaKnown RBP14.71□□□□□ -0.05
COL7A1-207ENST00000467985 TUSC2O75896 110 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 LY86O95711 162 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 PTHLHP12272 177 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 ZP3P21754 424 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 CBX5P45973 191 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 ARPC4P59998 168 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 C11orf87Q6NUJ2 197 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 OVCH2Q7RTZ1 564 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 ELOVL1Q9BW60 279 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 TINAGL1Q9GZM7 467 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-207ENST00000467985 NBEAL2Q6ZNJ1 2754 aa14.7□□□□□ -0.06
COL7A1-207ENST00000467985 MEIS3P1A6NDR6 274 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 MSGN1A6NI15 193 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 J3QRK9 145 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 FCGR3BO75015 233 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 ACTL6BO94805 426 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 TPPPO94811 219 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 CDK10Q15131 360 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 TNXAQ16473 311 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 MRGPRG-AS1Q2M3A8 158 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 PYDC2Q56P42 97 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 BEST4Q8NFU0 473 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 USMG5Q96IX5 58 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 OR4C12Q96R67 309 aa14.69□□□□□ -0.06
COL7A1-207ENST00000467985 TNCP24821 2201 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 IGKV1D-13A0A0B4J2D9 117 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms