RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 IL3RAP26951 378 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 RPL12P30050 165 aaKnown RBP11.97□□□□□ -0.49
DDX56-208ENST00000467318 SAA4P35542 130 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 SRP14P37108 136 aaKnown RBP11.97□□□□□ -0.49
DDX56-208ENST00000467318 PIGPP57054 158 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 HERV-K104P61576 105 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 GGNBP1Q5YKI7 109 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 C9orf139Q6ZV77 190 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 LGI3Q8N145 548 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 MALSU1Q96EH3 234 aa11.97□□□□□ -0.49
DDX56-208ENST00000467318 MS4A7Q9GZW8 240 aaPredicted RBP11.97□□□□□ -0.49
DDX56-208ENST00000467318 PARP12Q9H0J9 701 aaKnown RBP11.97□□□□□ -0.49
DDX56-208ENST00000467318 IGHV3OR16-10A0A075B7F0 116 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 PIGBOS1A0A0B4J2F0 54 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 TMEM218A2RU14 115 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 E5RGE8 158 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 K7EPK0 472 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 RAB29O14966 203 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 SLC31A2O15432 143 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 DEDDO75618 318 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 OR8U9P0C7N5 309 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 HKR1P10072 659 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 ZNF137PP52743 207 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 TMEM187Q14656 261 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 BRD3OSQ6XYD6 125 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 LIAT1Q6ZQX7 453 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 LYG1Q8N1E2 194 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 FAM71E2Q8N5Q1 922 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 OR8U1Q8NH10 309 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 MOB3AQ96BX8 217 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 IFI27L2Q9H2X8 130 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 NSG2Q9Y328 171 aa11.96□□□□□ -0.5
DDX56-208ENST00000467318 A0A1W2PRD5 423 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 A0A1W2PRF3 423 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 A0A1W2PRM7 423 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 ST8SIA5O15466 376 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 FAM157CP0CG43 387 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 EPHA1P21709 976 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 AADACP22760 399 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 DEFA5Q01523 94 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 PJVKQ0ZLH3 352 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 PXDC1Q5TGL8 231 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 IL17RELQ6ZVW7 336 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 SVBPQ8N300 66 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 RTN4IP1Q8WWV3 396 aaPredicted RBP11.95□□□□□ -0.5
DDX56-208ENST00000467318 NARS2Q96I59 477 aaKnown RBP11.95□□□□□ -0.5
DDX56-208ENST00000467318 RSRP1Q9BUV0 290 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 GAB2Q9UQC2 676 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 POMT1Q9Y6A1 747 aa11.95□□□□□ -0.5
DDX56-208ENST00000467318 NAV3Q8IVL0 2385 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 OOSP1A8MZH6 123 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ATG12O94817 140 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 RUSC1-AS1Q66K80 236 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 FAM71F2Q6NXP2 309 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ODF3L1Q8IXM7 274 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.94□□□□□ -0.5
DDX56-208ENST00000467318 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 TOMM40LQ969M1 308 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ST6GALNAC6Q969X2 333 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 RPEQ96AT9 228 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ABHD14BQ96IU4 210 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 SMIM8Q96KF7 97 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 S1PR3Q99500 378 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 NKX6-2Q9C056 277 aaPredicted RBP11.94□□□□□ -0.5
DDX56-208ENST00000467318 PRR13Q9NZ81 148 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ZNRD1Q9P1U0 126 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 FAM96BQ9Y3D0 163 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 TMED3Q9Y3Q3 217 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 MTORP42345 2549 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 BORCS7-ASMTA0A0B4J1R7 106 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 MSGN1A6NI15 193 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ZNF705EA8MWA4 302 aaPredicted RBP11.94□□□□□ -0.5
DDX56-208ENST00000467318 LY6LH3BQJ8 138 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ATF4P18848 351 aaPredicted RBP11.94□□□□□ -0.5
DDX56-208ENST00000467318 GPR12P47775 334 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 SULT1A2P50226 295 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 CCDC144NLQ6NUI1 221 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 LHFPL4Q7Z7J7 247 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 SPAG16Q8N0X2 631 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ZNF645Q8N7E2 425 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 OR2D2Q9H210 308 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 RNF150Q9ULK6 438 aa11.94□□□□□ -0.5
DDX56-208ENST00000467318 ANK3Q12955 4377 aaKnown RBP11.93□□□□□ -0.5
DDX56-208ENST00000467318 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 IGKV1D-13A0A0B4J2D9 117 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 INAFM1C9JVW0 142 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 TXNL1O43396 289 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 GPR137BO60478 399 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 FBP1P09467 338 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
DDX56-208ENST00000467318 IGKV1-13P0DP09 117 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 SRD5A1P18405 259 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 ARHGDIBP52566 201 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 FXYD4P59646 89 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 MSMO1Q15800 293 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 SSX2Q16385 188 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 LDLRAD2Q5SZI1 272 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 C10orf91Q5T1B1 145 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms