RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 A0A087WUU8 490 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 A0A0J9YX75 114 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 A0A1B0GV50 99 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 MDFIC2A0A1B0GVS7 189 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 TMEM114B3SHH9 223 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 EEF1E1-BLOC1S5C9J1V9 151 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 H3BPC8 53 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 ZNF73O43830 326 aaPredicted RBP1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 ATP5HO75947 161 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 KRT75O95678 551 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 TCRBP04435 133 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 OR5G3P0C626 314 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 ALOX5APP20292 161 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 RPL27AP46776 148 aaKnown RBP1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 ZNF140P52738 457 aaPredicted RBP1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 AP3S2P59780 193 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 TNFAIP6P98066 277 aaPredicted RBP1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 PMAIP1Q13794 54 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 SPOPLQ6IQ16 392 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 SLC22A24Q8N4F4 322 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 TMEM86BQ8N661 226 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 OR13C8Q8NGS7 320 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 SGMS2Q8NHU3 365 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 LHFPL5Q8TAF8 219 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 ANKRD7Q92527 254 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 CHMP6Q96FZ7 201 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 TMEM222Q9H0R3 208 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 AK3Q9UIJ7 227 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 MMACHCQ9Y4U1 282 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 SNAPC4Q5SXM2 1469 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 SHANK3Q9BYB0 1731 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 CACNA1SQ13698 1873 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 ZNF407Q9C0G0 2248 aa1.79□□□□□ -2.12
PRPF40A-205ENST00000467114 DSCAMO60469 2012 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 IGHV3-15A0A0B4J1V0 119 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 A0A1B0GW54 56 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 CLDN24A6NM45 220 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 INMT-MINDY4F8WBC2 141 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 KPNA3O00505 521 aaPredicted RBP1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 HAAOP46952 286 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 GZMMP51124 257 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 RBM11P57052 281 aaKnown RBP1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 FKBP1AP62942 108 aaKnown RBP1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 TNFRSF9Q07011 255 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 SMARCD3Q6STE5 483 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 ALKAL1Q6UXT8 129 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 C2orf91Q6ZV80 131 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 TCF24Q7RTU0 167 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 GLT6D1Q7Z4J2 308 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 CLDN22Q8N7P3 220 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 OR2T4Q8NH00 348 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 FGF13Q92913 245 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 CNBD2Q96M20 576 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 C20orf166-AS1Q96NR2 134 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 MIEN1Q9BRT3 115 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 TUBA4BQ9H853 241 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 SLC22A13Q9Y226 551 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 ANGPT4Q9Y264 503 aa1.78□□□□□ -2.12
PRPF40A-205ENST00000467114 PLXNB1O43157 2135 aa1.78□□□□□ -2.13
PRPF40A-205ENST00000467114 TMEM235A6NFC5 223 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 ODF3BA8MYP8 253 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 LST1O00453 97 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 TXNDC9O14530 226 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 CTXN2P0C2S0 81 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 FGF6P10767 208 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 CD79AP11912 226 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 CBR1P16152 277 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 GZMHP20718 246 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 BLVRBP30043 206 aaPredicted RBP1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 GABRA4P48169 554 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 IDH3GP51553 393 aaPredicted RBP1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 TAS2R20P59543 309 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 RANP62826 216 aaKnown RBP1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 RPL30P62888 115 aaKnown RBP1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 REEP5Q00765 189 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 IFITM2Q01629 132 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 CAV1Q03135 178 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 FOXF1Q12946 379 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 SRSF6Q13247 344 aaKnown RBP1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 TNFAIP8L3Q5GJ75 292 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 C1orf158Q8N1D5 194 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 OR4C16Q8NGL9 310 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 OR1L8Q8NGR8 309 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 CLDND2Q8NHS1 167 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 OR52E6Q96RD3 313 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 TAAR3PQ9P1P4 343 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 PRELID1Q9Y255 219 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 ATG2BQ96BY7 2078 aa1.77□□□□□ -2.13
PRPF40A-205ENST00000467114 DOCK6Q96HP0 2047 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 TRPM6Q9BX84 2022 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 ZFYVE9O95405 1425 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 TMEM269A0A1B0GVZ9 245 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 A0A1W2PQD3 144 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 C11orf86A6NJI1 115 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 A8MUN3 132 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 PLA2G10O15496 165 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 TRAPPC3O43617 180 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 CHP2O43745 196 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms