RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 RPL30P62888 115 aaKnown RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 FGL1Q08830 312 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 HABP2Q14520 560 aaPredicted RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 ANKRD55Q3KP44 614 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 MIDNQ504T8 468 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 PHLDA2Q53GA4 152 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 PRAMEF5Q5TYX0 476 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 HCP5Q6MZN7 132 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 FAM53AQ6NSI3 398 aaPredicted RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 GSG1LQ6UXU4 331 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 AKAP14Q86UN6 197 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 ZNF575Q86XF7 245 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 ZNF695Q8IW36 515 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 SELENOHQ8IZQ5 122 aaKnown RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 OR8H3Q8N146 312 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 OR5M8Q8NGP6 311 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 UBALD1Q8TB05 177 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 NRGNQ92686 78 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 RBPMSQ93062 196 aaKnown RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 C5orf30Q96GV9 206 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 TP53RKQ96S44 253 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 SPIN2AQ99865 258 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 SPIN2BQ9BPZ2 258 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 NABP2Q9BQ15 211 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 CLEC7AQ9BXN2 247 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 REG4Q9BYZ8 158 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 ZNF436Q9C0F3 470 aaPredicted RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 OR2D2Q9H210 308 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 RANBP3Q9H6Z4 567 aaPredicted RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 LPAR2Q9HBW0 351 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 MMP26Q9NRE1 261 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 COA4Q9NYJ1 87 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 COMMD9Q9P000 198 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 DPM3Q9P2X0 92 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 MGAT4CQ9UBM8 478 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 RNF150Q9ULK6 438 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 PRELID3BQ9Y3B1 194 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 hCG_2014768A0A024R1R8 64 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 TRGV11A0A075B6L2 103 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 SAA2-SAA4A0A096LPE2 208 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 LINC00473A8K010 186 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 HMSDA8MTL9 139 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 LEUTXA8MZ59 168 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 PITX3O75364 302 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 C1QBP02746 253 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 SERPINE2P07093 398 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 P0C879 139 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 SAA2P0DJI9 122 aaPredicted RBP4.42□□□□□ -1.7
VPS41-211ENST00000466017 SLC25A4P12235 298 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 LYL1P12980 280 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 CXCL3P19876 107 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 HTR1DP28221 377 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 CD1BP29016 333 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 CEACAM3P40198 252 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 LGALS7P47929 136 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 AKAP6Q13023 2319 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 EBI3Q14213 229 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 SLC9A3R2Q15599 337 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 LTC4SQ16873 150 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 C2orf68Q2NKX9 166 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 SP6Q3SY56 376 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 AARDQ4LEZ3 155 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 NMSQ5H8A3 153 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 UTF1Q5T230 341 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 TMEM268Q5VZI3 342 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 GGNBP1Q5YKI7 109 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 TMEM65Q6PI78 240 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 PDPNQ86YL7 162 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 SPAG16Q8N0X2 631 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 LYG1Q8N1E2 194 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 ZNF383Q8NA42 475 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 OR4P4Q8NGL7 312 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 LHFPL5Q8TAF8 219 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 OSR1Q8TAX0 266 aaPredicted RBP4.42□□□□□ -1.7
VPS41-211ENST00000466017 CASTOR1Q8WTX7 329 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 MALSU1Q96EH3 234 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 SEC22AQ96IW7 307 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 HYLS1Q96M11 299 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 TBX15Q96SF7 602 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 KCNS2Q9ULS6 477 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 MMP24Q9Y5R2 645 aa4.42□□□□□ -1.7
VPS41-211ENST00000466017 CHD6Q8TD26 2715 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 ARHGAP32A7KAX9 2087 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 FAM90A26D6RGX4 464 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 RNASEK-C17orf49H0YIS7 233 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 H0YJW9 148 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 M0R1X1 148 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 GOSR2O14653 212 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 HRASP01112 189 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 IGKV1-39P01597 117 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 IGKV1D-39P04432 117 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 NQO2P16083 231 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 PSMB6P28072 239 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 LPAR6P43657 344 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 RAB13P51153 203 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 DYNLT3P51808 116 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 H2BFSP57053 126 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 LCN2P80188 198 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 AANATQ16613 207 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 PDLIM3Q53GG5 364 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms