RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 GPHA2Q96T91 129 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 CITED1Q99966 193 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 MCUBQ9NWR8 336 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 PLXNB1O43157 2135 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 ANK2Q01484 3957 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 IGHV7-81A0A0B4J1V7 117 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 SRRM4A7MD48 611 aaKnown RBP13.38□□□□□ -0.27
USP39-211ENST00000465282 B3GALNT1O75752 331 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 CTSDP07339 412 aaPredicted RBP13.38□□□□□ -0.27
USP39-211ENST00000465282 TAS2R31P59538 309 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 SLC35B1P78383 322 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 TMEM95Q3KNT9 176 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 PHLDA2Q53GA4 152 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 OR2B11Q5JQS5 317 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 ZNF57Q68EA5 555 aaPredicted RBP13.38□□□□□ -0.27
USP39-211ENST00000465282 FAAP20Q6NZ36 180 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 IDO2Q6ZQW0 420 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 STPG2Q8N412 459 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 HSPB9Q9BQS6 159 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 OR51J1Q9H342 316 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 HRASLSQ9HDD0 168 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 COMMD9Q9P000 198 aa13.38□□□□□ -0.27
USP39-211ENST00000465282 NAP1L6A6NFF2 107 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 MPPED1O15442 326 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 RAMP3O60896 148 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 NQO2P16083 231 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 PPP5CP53041 499 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 PIGPP57054 158 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 CX3CL1P78423 397 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 BAK1Q16611 211 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 POU2AF1Q16633 256 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 CADM3Q8N126 398 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 COMMD1Q8N668 190 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 OR13C8Q8NGS7 320 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 MARCH1Q8TCQ1 289 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 MRGPRFQ96AM1 343 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 RHOVQ96L33 236 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 SDHCQ99643 169 aaPredicted RBP13.37□□□□□ -0.27
USP39-211ENST00000465282 CCDC32Q9BV29 185 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 COPZ2Q9P299 210 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 GPR132Q9UNW8 380 aa13.37□□□□□ -0.27
USP39-211ENST00000465282 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
USP39-211ENST00000465282 TNCP24821 2201 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 PSMB11A5LHX3 300 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 CENPXA8MT69 81 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 FCN1O00602 326 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 OR2A4O95047 310 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 CD40LGP29965 261 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 CRIP2P52943 208 aaPredicted RBP13.36□□□□□ -0.27
USP39-211ENST00000465282 TMEM267Q0VDI3 215 aaPredicted RBP13.36□□□□□ -0.27
USP39-211ENST00000465282 MMD2Q8IY49 270 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 OR5AU1Q8NGC0 362 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 OR4A5Q8NH83 315 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 OR2A7Q96R45 310 aa13.36□□□□□ -0.27
USP39-211ENST00000465282 SLC25A21Q9BQT8 299 aaPredicted RBP13.36□□□□□ -0.27
USP39-211ENST00000465282 C7orf50Q9BRJ6 194 aaKnown RBP13.36□□□□□ -0.27
USP39-211ENST00000465282 LINC01548A6NM66 108 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 FBXO24O75426 580 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 CA2P00918 260 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 FGF2P09038 288 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 SAA1P0DJI8 122 aaPredicted RBP13.35□□□□□ -0.27
USP39-211ENST00000465282 IL7P13232 177 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 RPA2P15927 270 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 VDAC1P21796 283 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 KRTAP10-3P60369 221 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 PRSS8Q16651 343 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 PUSL1Q8N0Z8 303 aaKnown RBP13.35□□□□□ -0.27
USP39-211ENST00000465282 OR4X2Q8NGF9 303 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 WDR12Q9GZL7 423 aaKnown RBP13.35□□□□□ -0.27
USP39-211ENST00000465282 BET1LQ9NYM9 111 aa13.35□□□□□ -0.27
USP39-211ENST00000465282 TET2Q6N021 2002 aaPredicted RBP13.35□□□□□ -0.27
USP39-211ENST00000465282 H0Y980 276 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 ATP6V0E1O15342 81 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 ACTL6BO94805 426 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 CNIH1O95406 144 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 PI3P19957 117 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 MAS1LP35410 378 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 ERVK-16P61578 105 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 ZNF585BQ52M93 769 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 AKIRIN2Q53H80 203 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 TEX38Q6PEX7 206 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 SGMS2Q8NHU3 365 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 TMEM167AQ8TBQ9 72 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 TMEM68Q96MH6 324 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 NOL4LQ96MY1 436 aaPredicted RBP13.34□□□□□ -0.27
USP39-211ENST00000465282 CLCC1Q96S66 551 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 RTBDNQ9BSG5 229 aaPredicted RBP13.34□□□□□ -0.27
USP39-211ENST00000465282 PARP11Q9NR21 331 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 TPSG1Q9NRR2 321 aa13.34□□□□□ -0.27
USP39-211ENST00000465282 C3orf85A0A1B0GTC6 90 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 KBTBD11O94819 623 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 SERPINE2P07093 398 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 LPAR6P43657 344 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 ZNF846Q147U1 533 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 FXYD3Q14802 87 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 ARPC1AQ92747 370 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 R3HDM4Q96D70 268 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 C5orf66Q9H5L9 145 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms