RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 TNFSF13O75888 250 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 SFTPCP11686 197 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 CRISP2P16562 243 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 TIMP3P35625 211 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 KIAA1644Q3SXP7 199 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 SPATA31B1PQ5VZV4 182 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 BAGE3Q86Y29 109 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 BAGE2Q86Y30 109 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 OR10G8Q8NGN5 311 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 OR2J1Q9GZK6 312 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 ZNF576Q9H609 170 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 YTHDF2Q9Y5A9 579 aaKnown RBP10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 DCHS1Q96JQ0 3298 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 TRAV34A0A0B4J273 112 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 HBZP02008 142 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 OR9G9P0C7N8 305 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 SSTR5P35346 364 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 ASPHD1Q5U4P2 390 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 APH1AQ96BI3 265 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 GALMQ96C23 342 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 PKIBQ9C010 78 aa10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 SMG1Q96Q15 3661 aaKnown RBP10.5□□□□□ -0.73
CLCNKA-204ENST00000464764 IGKV3D-15A0A087WSY6 115 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 RNF212BA8MTL3 300 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 C17orf112F2Z3M2 114 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 SH2D1BO14796 132 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 FOXH1O75593 365 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 RAC2P15153 192 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 MAGEA5P43359 124 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 CLDN18P56856 261 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 TRIP6Q15654 476 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 TEX43Q6ZNM6 134 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 MDP1Q86V88 176 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 K7ESF4 209 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 FCN1O00602 326 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 CLDN14O95500 239 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 IGHEP01854 428 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 COMPP49747 757 aaPredicted RBP10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 TPPP2P59282 170 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 ERVK11-1P61568 191 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 EIF4EBP1Q13541 118 aaPredicted RBP10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 VWC2Q2TAL6 325 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 NRN1LQ496H8 165 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 SAMD10Q9BYL1 202 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 KCNIP2Q9NS61 270 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 FBXL7Q9UJT9 491 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 WIPI2Q9Y4P8 454 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 PATE3B3GLJ2 98 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 TCF21O43680 179 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 CD99P14209 185 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 KRTDAPP60985 99 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 MOB1BQ7L9L4 216 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 ABHD12Q8N2K0 398 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 VAMP8Q9BV40 100 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 PHF7Q9BWX1 381 aaPredicted RBP10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 LINC00470Q9BZP3 86 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 TUBG2Q9NRH3 451 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 KCNIP1Q9NZI2 227 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 PSG11Q9UQ72 335 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 WDR83OSQ9Y284 106 aa10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 MRPS18CQ9Y3D5 142 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-204ENST00000464764 HAND1O96004 215 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 CFIP05156 583 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 ARR3P36575 388 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 RPL31P62899 125 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 MMDQ15546 238 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 TREML4Q6UXN2 200 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 SPEM1Q8N4L4 309 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 OR2M7Q8NG81 312 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 OR1L6Q8NGR2 347 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 GABRA2P47869 451 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 UBE2NP61088 152 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 MRPS11P82912 194 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 LYSMD4Q5XG99 296 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 Q6ZVH6 145 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 OR5AU1Q8NGC0 362 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 MGST2Q99735 147 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 C20orf144Q9BQM9 153 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 LRFN3Q9BTN0 628 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 MS4A5Q9H3V2 200 aa10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 SEPSECSQ9HD40 501 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-204ENST00000464764 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 CXCL12P48061 93 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 TRA2AQ13595 282 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 MRPS17Q9Y2R5 130 aaKnown RBP10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 SNURFLB1AK76 121 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 CYC1P08574 325 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 RELQ04864 619 aaPredicted RBP10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 ST6GALNAC3Q8NDV1 305 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 RTL8AQ9BWD3 113 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 M0QZK8 103 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 RAB29O14966 203 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 SELENOTP62341 195 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 CATR1Q13166 79 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 ZNF146Q15072 292 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 PDLIM3Q53GG5 364 aaPredicted RBP10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 OR8I2Q8N0Y5 310 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms