RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 MRGPRGQ86SM5 289 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 CA5BP1Q8WTZ4 195 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 COL25A1Q9BXS0 654 aaPredicted RBP16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 NPCDR1Q9BY65 106 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 TMPRSS5Q9H3S3 457 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 YLPM1P49750 1951 aaKnown RBP16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 KALRNO60229 2985 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 AGAP20933 346 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 FFAR4Q5NUL3 377 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 TET2Q6N021 2002 aaPredicted RBP16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 SAA2-SAA4A0A096LPE2 208 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 TRGV10A0A0A0MS01 117 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 DPRXA6NFQ7 191 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 SAA2P0DJI9 122 aaPredicted RBP16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 HOXA1P49639 335 aaPredicted RBP16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 GNB2P62879 340 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 OR10G4Q8NGN3 311 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 OR10G9Q8NGN4 311 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 OR10G7Q8NGN6 311 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 YPEL4Q96NS1 127 aa16.81■□□□□ 0.28
TUBGCP3-204ENST00000464139 DEFA4P12838 97 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 ERVK-16P61578 105 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 GFRALQ6UXV0 394 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 TMEM140Q9NV12 185 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 NQO2P16083 231 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 GNG10P50151 68 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 RELBQ01201 579 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 FOXC1Q12948 553 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 VWC2Q2TAL6 325 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 ZNF343Q6P1L6 599 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 NUP37Q8NFH4 326 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 DDB2Q92466 427 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 VAX2Q9UIW0 290 aa16.8■□□□□ 0.28
TUBGCP3-204ENST00000464139 RBFOX2O43251 390 aaKnown RBP eCLIP16.79■□□□□ 0.283e-7■■■■□ 22.1
TUBGCP3-204ENST00000464139 MMP23AO75900 390 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 IFNA10P01566 189 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 ZNF788Q6ZQV5 615 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 SLC35E3Q7Z769 313 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 LYG1Q8N1E2 194 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 HEYLQ9NQ87 328 aaPredicted RBP16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 URGCP-MRPS24S4R325 110 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 RAB7AP51149 207 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 SPCS3P61009 180 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 BSPH1Q075Z2 132 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 AARDQ4LEZ3 155 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 PRR30Q53SZ7 412 aaPredicted RBP16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 ZNF709Q8N972 641 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 NCOR1P1Q9H4R4 102 aa16.79■□□□□ 0.28
TUBGCP3-204ENST00000464139 THBDP07204 575 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 OR4A8P0C604 315 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 IRF2P14316 349 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 ERVFRD-1P60508 538 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 ADIPOQQ15848 244 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 FAM216AQ8WUB2 273 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 FAM90A9PA6NNJ1 464 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 RRHO14718 337 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 IFNA1P01562 189 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 MDKP21741 143 aaPredicted RBP16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 ZNF251Q9BRH9 671 aa16.78■□□□□ 0.28
TUBGCP3-204ENST00000464139 A0A087WWC5 75 aa16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 CTXND1A0A1B0GTU2 59 aa16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 MRPS11P82912 194 aaKnown RBP16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 HEPN1Q6WQI6 88 aa16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 SPACA3Q8IXA5 215 aa16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 ABHD12Q8N2K0 398 aa16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 OR4S2Q8NH73 311 aa16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 GATAD1Q8WUU5 269 aa16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 ZNRD1Q9P1U0 126 aa16.77■□□□□ 0.28
TUBGCP3-204ENST00000464139 SMCO3A2RU48 225 aa16.77■□□□□ 0.27
TUBGCP3-204ENST00000464139 TMPRSS2O15393 492 aa16.77■□□□□ 0.27
TUBGCP3-204ENST00000464139 S100A6P06703 90 aa16.77■□□□□ 0.27
TUBGCP3-204ENST00000464139 VDAC2P45880 294 aaPredicted RBP16.77■□□□□ 0.27
TUBGCP3-204ENST00000464139 ZNF383Q8NA42 475 aa16.77■□□□□ 0.27
TUBGCP3-204ENST00000464139 P2RX4Q99571 388 aa16.77■□□□□ 0.27
TUBGCP3-204ENST00000464139 ELOVL5Q9NYP7 299 aa16.77■□□□□ 0.27
TUBGCP3-204ENST00000464139 IDI2-AS1Q9NZ38 188 aa16.77■□□□□ 0.27
TUBGCP3-204ENST00000464139 ITGB1BP1O14713 200 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 MBP02144 154 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 NDUFB7P17568 137 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 CD1BP29016 333 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 MAS1LP35410 378 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 KIR2DS2P43631 304 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 CD81P60033 236 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 IQCF2Q8IXL9 164 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 Q8WTZ3 238 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 RAB24Q969Q5 203 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 RAB9BQ9NP90 201 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 PKDREJQ9NTG1 2253 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 RBMS3Q6XE24 437 aaKnown RBP16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 Q8N7P7 452 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 ZNF439Q8NDP4 499 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 RHOVQ96L33 236 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 ACTR3CQ9C0K3 210 aaPredicted RBP16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 GAB2Q9UQC2 676 aa16.76■□□□□ 0.27
TUBGCP3-204ENST00000464139 CXCL1P09341 107 aa16.75■□□□□ 0.27
TUBGCP3-204ENST00000464139 RPS10P46783 165 aaKnown RBP16.75■□□□□ 0.27
TUBGCP3-204ENST00000464139 ELOBQ15370 118 aa16.75■□□□□ 0.27
TUBGCP3-204ENST00000464139 TBR1Q16650 682 aa16.75■□□□□ 0.27
TUBGCP3-204ENST00000464139 GCSAMLQ5JQS6 135 aa16.75■□□□□ 0.27
TUBGCP3-204ENST00000464139 TEX36Q5VZQ5 186 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms