RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RTBDNQ9BSG5 229 aaPredicted RBP9.34□□□□□ -0.91
CPNE1-221ENST00000462352 SERTAD4Q9NUC0 356 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 COPZ2Q9P299 210 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 VSIG4Q9Y279 399 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 RNF114Q9Y508 228 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 FCN1O00602 326 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 S1PR2O95136 353 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 CRYGBP07316 175 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 SAA1P0DJI8 122 aaPredicted RBP9.33□□□□□ -0.92
CPNE1-221ENST00000462352 BTCP35070 178 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 VDAC2P45880 294 aaPredicted RBP9.33□□□□□ -0.92
CPNE1-221ENST00000462352 CCR6P51684 374 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 PROK1P58294 105 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 UBE2KP61086 200 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 VMA21Q3ZAQ7 101 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 ZNF585BQ52M93 769 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 SLC35E3Q7Z769 313 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 VKORC1L1Q8N0U8 176 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 CLCC1Q96S66 551 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 SLC25A21Q9BQT8 299 aaPredicted RBP9.33□□□□□ -0.92
CPNE1-221ENST00000462352 TPSG1Q9NRR2 321 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
CPNE1-221ENST00000462352 IGHV7-81A0A0B4J1V7 117 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 C3orf85A0A1B0GTC6 90 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 LINC01548A6NM66 108 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 LYRM1O43325 122 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 KCNAB3O43448 404 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 UPK1BO75841 260 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 HRASP01112 189 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 LPAR6P43657 344 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 TAS2R31P59538 309 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 C12orf54Q6X4T0 127 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 PPP1R27Q86WC6 154 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 TEX45Q8NA69 505 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 TMEM230Q96A57 120 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 RHOVQ96L33 236 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 TP53RKQ96S44 253 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 PLEKHA2Q9HB19 425 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 FAM212BQ9NTI7 297 aaPredicted RBP9.32□□□□□ -0.92
CPNE1-221ENST00000462352 COMMD9Q9P000 198 aa9.32□□□□□ -0.92
CPNE1-221ENST00000462352 CRYM-AS1A6NIL9 109 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 H0Y980 276 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 CA2P00918 260 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 NQO2P16083 231 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 CX3CL1P78423 397 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 NDPQ00604 133 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 IFITM3Q01628 133 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 PJVKQ0ZLH3 352 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 RBMS2Q15434 407 aaKnown RBP9.31□□□□□ -0.92
CPNE1-221ENST00000462352 MRGPRG-AS1Q2M3A8 158 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 SSX9Q7RTT3 188 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 FOXRED2Q8IWF2 684 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 PUSL1Q8N0Z8 303 aaKnown RBP9.31□□□□□ -0.92
CPNE1-221ENST00000462352 KLHDC1Q8N7A1 406 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 ADAD2Q8NCV1 583 aaKnown RBP9.31□□□□□ -0.92
CPNE1-221ENST00000462352 VSTM2AQ8TAG5 236 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 R3HDM4Q96D70 268 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 NOL4LQ96MY1 436 aaPredicted RBP9.31□□□□□ -0.92
CPNE1-221ENST00000462352 AIFM2Q9BRQ8 373 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 WNT10AQ9GZT5 417 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 OR51J1Q9H342 316 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 NAA60Q9H7X0 242 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 LINC00527Q9UJ94 153 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 TBC1D24Q9ULP9 559 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 STAB1Q9NY15 2570 aa9.31□□□□□ -0.92
CPNE1-221ENST00000462352 TEX13DA0A0J9YY54 714 aaPredicted RBP9.3□□□□□ -0.92
CPNE1-221ENST00000462352 MARCH11A6NNE9 402 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 AP4M1O00189 453 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 B3GALNT1O75752 331 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 KBTBD11O94819 623 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 OR2A4O95047 310 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 NDUFB6O95139 128 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 IGKV1-39P01597 117 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 IGKV1D-39P04432 117 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 SERPINE2P07093 398 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 OR5AC1P0C628 307 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 RPA2P15927 270 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 AKR1C4P17516 323 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 SSBP2P81877 361 aaPredicted RBP9.3□□□□□ -0.92
CPNE1-221ENST00000462352 ASAH1Q13510 395 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 POU2AF1Q16633 256 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 PRSS8Q16651 343 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 SP6Q3SY56 376 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 OR4A47Q6IF82 309 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 ZNF562Q6V9R5 426 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 TMED4Q7Z7H5 227 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 DMBX1Q8NFW5 382 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 TMEM167AQ8TBQ9 72 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 WFDC12Q8WWY7 111 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 OR2A7Q96R45 310 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 PARP11Q9NR21 331 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 BET1LQ9NYM9 111 aa9.3□□□□□ -0.92
CPNE1-221ENST00000462352 ARPC1BO15143 372 aaKnown RBP9.29□□□□□ -0.92
CPNE1-221ENST00000462352 ATP6V0E1O15342 81 aa9.29□□□□□ -0.92
CPNE1-221ENST00000462352 KRASP01116 189 aa9.29□□□□□ -0.92
CPNE1-221ENST00000462352 IGF1P05019 195 aa9.29□□□□□ -0.92
CPNE1-221ENST00000462352 UCP1P25874 307 aa9.29□□□□□ -0.92
CPNE1-221ENST00000462352 G6PCP35575 357 aa9.29□□□□□ -0.92
CPNE1-221ENST00000462352 KRTAP10-3P60369 221 aa9.29□□□□□ -0.92
CPNE1-221ENST00000462352 ERVK-16P61578 105 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms