RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 NKX6-2Q9C056 277 aaPredicted RBP2.14□□□□□ -2.07
CCT4-203ENST00000461540 RNASE7Q9H1E1 156 aaKnown RBP2.14□□□□□ -2.07
CCT4-203ENST00000461540 SMPXQ9UHP9 88 aa2.14□□□□□ -2.07
CCT4-203ENST00000461540 PHLDA3Q9Y5J5 127 aa2.14□□□□□ -2.07
CCT4-203ENST00000461540 ICOSQ9Y6W8 199 aa2.14□□□□□ -2.07
CCT4-203ENST00000461540 PIK3C2GO75747 1445 aa2.14□□□□□ -2.07
CCT4-203ENST00000461540 PIKFYVEQ9Y2I7 2098 aa2.14□□□□□ -2.07
CCT4-203ENST00000461540 IFT140Q96RY7 1462 aa2.14□□□□□ -2.07
CCT4-203ENST00000461540 AHDC1Q5TGY3 1603 aaPredicted RBP2.13□□□□□ -2.07
CCT4-203ENST00000461540 MTUS2Q5JR59 1369 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 DHX57Q6P158 1386 aaKnown RBP2.13□□□□□ -2.07
CCT4-203ENST00000461540 ARAP3Q8WWN8 1544 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 CUL7Q14999 1698 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 EXOC1LA0A1B0GW35 172 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 ZNF729A6NN14 1252 aaPredicted RBP2.13□□□□□ -2.07
CCT4-203ENST00000461540 G3V2T6 193 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 PIRO00625 290 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 UBE2L6O14933 153 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 HMGB3O15347 200 aaKnown RBP2.13□□□□□ -2.07
CCT4-203ENST00000461540 S1PR2O95136 353 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 FSTL3O95633 263 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 LHBP01229 141 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 IGHG2P01859 326 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 TRGV3P03979 118 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 CBR1P16152 277 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 MDKP21741 143 aaPredicted RBP2.13□□□□□ -2.07
CCT4-203ENST00000461540 ERP29P30040 261 aaKnown RBP2.13□□□□□ -2.07
CCT4-203ENST00000461540 DEFA1P59665 94 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 RAB4BP61018 213 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 TBPL2Q6SJ96 375 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 UNQ9165/PRO28630Q6UXU0 137 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 GOLT1AQ6ZVE7 132 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 SAXO1Q8IYX7 474 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 SMIM20Q8N5G0 67 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 OR11H6Q8NGC7 330 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 OR10A6Q8NH74 314 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 OR5P3Q8WZ94 311 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 KLK6Q92876 244 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 GPER1Q99527 375 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 GINS3Q9BRX5 216 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 OR2D2Q9H210 308 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 LINC00574Q9H8X3 128 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 ZNF586Q9NXT0 402 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 TAAR3PQ9P1P4 343 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 RPUSD1Q9UJJ7 312 aaKnown RBP2.13□□□□□ -2.07
CCT4-203ENST00000461540 COQ4Q9Y3A0 265 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 ADCY10Q96PN6 1610 aa2.13□□□□□ -2.07
CCT4-203ENST00000461540 ABCA10Q8WWZ4 1543 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 RTL1A6NKG5 1358 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 TET2Q6N021 2002 aaPredicted RBP2.12□□□□□ -2.07
CCT4-203ENST00000461540 hCG_1818297A0A087WSY0 165 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 IGKV1-12A0A0C4DH73 117 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 LOC105371267A0A1B0GV96 52 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 A0A1B0GW54 56 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 A8MT66 165 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 TSTD3H0UI37 97 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 SH2D1AO60880 128 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 IGKV1D-33P01593 117 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 IGKV1-33P01594 117 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 IGKV1D-12P01611 117 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 C8GP07360 202 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 PFN1P07737 140 aaKnown RBP2.12□□□□□ -2.07
CCT4-203ENST00000461540 ZNF705DP0CH99 300 aaPredicted RBP2.12□□□□□ -2.07
CCT4-203ENST00000461540 CRABP1P29762 137 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 RPS20P60866 119 aaKnown RBP2.12□□□□□ -2.07
CCT4-203ENST00000461540 FGF12P61328 243 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 TNFAIP6P98066 277 aaPredicted RBP2.12□□□□□ -2.07
CCT4-203ENST00000461540 ZNF816Q0VGE8 651 aaPredicted RBP2.12□□□□□ -2.07
CCT4-203ENST00000461540 AMTNQ6UX39 209 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 GRINAQ7Z429 371 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 APCDD1LQ8NCL9 501 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 ZNF439Q8NDP4 499 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 OR4K13Q8NH42 304 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 TMEM70Q9BUB7 260 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 SLC23A2Q9UGH3 650 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 CAMSAP1Q5T5Y3 1602 aa2.12□□□□□ -2.07
CCT4-203ENST00000461540 TSPOAP1O95153 1857 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 DIP2BQ9P265 1576 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 FHAD1B1AJZ9 1412 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 TRBV20OR9-2A0A075B6H5 130 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 IGLV3-16A0A075B6K0 115 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 TRBV24-1A0A075B6N3 115 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 A0A0B4J2C4 111 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 TRAPPC13A5PLN9 417 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 A8MWP4 228 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 OR11H12B2RN74 326 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 H3BMM0 161 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.11□□□□□ -2.07
CCT4-203ENST00000461540 GPR31O00270 319 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 LST1O00453 97 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 SLC25A20O43772 301 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 NDUFC2O95298 119 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 RBP1P09455 135 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 CGB3P0DN86 165 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 CGB7P0DN87 165 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 S100GP29377 79 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 PHBP35232 272 aa2.11□□□□□ -2.07
CCT4-203ENST00000461540 ZNF140P52738 457 aaPredicted RBP2.11□□□□□ -2.07
CCT4-203ENST00000461540 TBPL1P62380 186 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms