RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.48□□□□□ -2.17
VCL-203ENST00000461383 IGHV3-15A0A0B4J1V0 119 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 IGHV1-69-2A0A0G2JMI3 117 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 MDFIC2A0A1B0GVS7 189 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 TMEM269A0A1B0GVZ9 245 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 A0A1B0GW54 56 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 A0A1W2PQD3 144 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 A0A1W2PQL4 384 aaPredicted RBP1.48□□□□□ -2.17
VCL-203ENST00000461383 OR4C45A6NMZ5 311 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 C2orf74A8MZ97 194 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 C9JCJ5 164 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 GNRH2O43555 120 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 NPYP01303 97 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 S100A6P06703 90 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 HIST1H1EP10412 219 aaKnown RBP1.48□□□□□ -2.17
VCL-203ENST00000461383 ALOX5APP20292 161 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 XCL1P47992 114 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 MARCKSL1P49006 195 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 RAP1GDS1P52306 607 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 FXYD7P58549 80 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 IMPG1Q17R60 797 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 LRRC75BQ2VPJ9 315 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 AGTRAPQ6RW13 159 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 SLC35E3Q7Z769 313 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 LHFPL1Q86WI0 220 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 SLC22A24Q8N4F4 322 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 OR4X2Q8NGF9 303 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 OR8J2Q8NGG1 315 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 DNAJC30Q96LL9 226 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 PECRQ9BY49 303 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 XPNPEP1Q9NQW7 623 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 AK3Q9UIJ7 227 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 ICE1Q9Y2F5 2266 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 GRIN2BQ13224 1484 aa1.48□□□□□ -2.17
VCL-203ENST00000461383 GREB1Q4ZG55 1949 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 A0A087WUU8 490 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 KNCNA6PVL3 124 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 CREBL2O60519 120 aaPredicted RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 RPP14O95059 124 aaKnown RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 IFNA16P05015 189 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 BPGMP07738 259 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 RPS17P08708 135 aaKnown RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 KCNE1P15382 129 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 FUSP35637 526 aaKnown RBP eCLIP1.47□□□□□ -2.17
VCL-203ENST00000461383 HAAOP46952 286 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 SULT1A1P50225 295 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 ZNF140P52738 457 aaPredicted RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 RBM11P57052 281 aaKnown RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 RPL30P62888 115 aaKnown RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 FKBP1AP62942 108 aaKnown RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 CAV1Q03135 178 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 AKR1C1Q04828 323 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 HIST3H3Q16695 136 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 RGS21Q2M5E4 152 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 ZNF550Q7Z398 422 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 GPHB5Q86YW7 130 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 UMODL1-AS1Q8N2C9 162 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 GPR32P1Q8NGA4 272 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 OR5J2Q8NH18 312 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 CLDND2Q8NHS1 167 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 RNASE6Q93091 150 aaKnown RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 IMP4Q96G21 291 aaKnown RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 PARD6GQ9BYG4 376 aaPredicted RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 PRELID1Q9Y255 219 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 ANGPT4Q9Y264 503 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 KLK5Q9Y337 293 aaPredicted RBP1.47□□□□□ -2.17
VCL-203ENST00000461383 RALGAPA2Q2PPJ7 1873 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 DOCK5Q9H7D0 1870 aa1.47□□□□□ -2.17
VCL-203ENST00000461383 TGIF2-C20orf24A0A0A6YYL0 155 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 TRGV5A0A0B4J1U4 118 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 LY6LH3BQJ8 138 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 KLRC4O43908 158 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 ZNF189O75820 626 aaPredicted RBP1.46□□□□□ -2.18
VCL-203ENST00000461383 LYPLA2O95372 231 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 P0DMU3 169 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 FAM231AP0DMU4 169 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 FAM231CP0DMU5 169 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 CCL1P22362 96 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 CD24P25063 80 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 ALDH3A1P30838 453 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 CCR2P41597 374 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 OMPP47874 163 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 RAB13P51153 203 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 SPCS3P61009 180 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 RAB5BP61020 215 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 ERHP84090 104 aaKnown RBP1.46□□□□□ -2.18
VCL-203ENST00000461383 LGALS9BQ3B8N2 356 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 PABPC1L2AQ5JQF8 200 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 SFXN4Q6P4A7 337 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 TRAPPC5Q8IUR0 188 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 DEFB125Q8N687 156 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 ZNF283Q8N7M2 679 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 LHFPL5Q8TAF8 219 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 SMCR5Q8TEV8 140 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 ROPN1LQ96C74 230 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 CNBD2Q96M20 576 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 TTTY13Q9BZ97 58 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 COQ4Q9Y3A0 265 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 NUP160Q12769 1436 aa1.46□□□□□ -2.18
VCL-203ENST00000461383 PLXNA3P51805 1871 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms