RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 TNFSF8P32971 234 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 NDPQ00604 133 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 SPAG16Q8N0X2 631 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 ARRDC1Q8N5I2 433 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 TMEM229BQ8NBD8 167 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 VSTM2AQ8TAG5 236 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 GPHA2Q96T91 129 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 AIFM2Q9BRQ8 373 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 SRRM4A7MD48 611 aaKnown RBP17.06■□□□□ 0.32
SSNA1-202ENST00000459860 ADARB2-AS1A8MUL3 147 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 NUDT19A8MXV4 375 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 GPR31O00270 319 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 IGHG4P01861 327 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 RPL23AP62750 156 aaKnown RBP17.06■□□□□ 0.32
SSNA1-202ENST00000459860 CFHR3Q02985 330 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 FXYD3Q14802 87 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 TMEM65Q6PI78 240 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 OR51H1Q8NH63 302 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 GRPEL2Q8TAA5 225 aa17.06■□□□□ 0.32
SSNA1-202ENST00000459860 G3V318 75 aa17.05■□□□□ 0.32
SSNA1-202ENST00000459860 RBFOX2O43251 390 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSNA1-202ENST00000459860 ACTL6BO94805 426 aa17.05■□□□□ 0.32
SSNA1-202ENST00000459860 HRASP01112 189 aa17.05■□□□□ 0.32
SSNA1-202ENST00000459860 CRYGBP07316 175 aa17.05■□□□□ 0.32
SSNA1-202ENST00000459860 SAA1P0DJI8 122 aaPredicted RBP17.05■□□□□ 0.32
SSNA1-202ENST00000459860 CRIP2P52943 208 aaPredicted RBP17.05■□□□□ 0.32
SSNA1-202ENST00000459860 CD300LFQ8TDQ1 290 aa17.05■□□□□ 0.32
SSNA1-202ENST00000459860 TINAGL1Q9GZM7 467 aaPredicted RBP17.05■□□□□ 0.32
SSNA1-202ENST00000459860 NOTCH1P46531 2555 aa17.05■□□□□ 0.32
SSNA1-202ENST00000459860 A0A1W2PN81 502 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 RAB3DO95716 219 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 PF4P02776 101 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 RLN1P04808 185 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 SLC6A1P30531 599 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 CHRNA7P36544 502 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 MEF2DQ14814 521 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 STEAP1BQ6NZ63 245 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 UNQ5815/PRO19632Q6UWF5 114 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 IDO2Q6ZQW0 420 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 SLC38A6Q8IZM9 456 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 KLHL30-AS1Q8NEE0 82 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 DGCR14Q96DF8 476 aaKnown RBP17.04■□□□□ 0.32
SSNA1-202ENST00000459860 FAM103A1Q9BTL3 118 aaKnown RBP17.04■□□□□ 0.32
SSNA1-202ENST00000459860 FOXA2Q9Y261 457 aaPredicted RBP17.04■□□□□ 0.32
SSNA1-202ENST00000459860 FBXO7Q9Y3I1 522 aa17.04■□□□□ 0.32
SSNA1-202ENST00000459860 PLXNB1O43157 2135 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 GSTZ1O43708 216 aaPredicted RBP17.03■□□□□ 0.32
SSNA1-202ENST00000459860 CD74P04233 296 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 RPLP1P05386 114 aaKnown RBP17.03■□□□□ 0.32
SSNA1-202ENST00000459860 PGAM2P15259 253 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 CD40LGP29965 261 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 PPIFP30405 207 aaKnown RBP17.03■□□□□ 0.32
SSNA1-202ENST00000459860 UCP3P55916 312 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 PJVKQ0ZLH3 352 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 TNXAQ16473 311 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 PRSS8Q16651 343 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 AKIRIN2Q53H80 203 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 MMD2Q8IY49 270 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 PHB2Q99623 299 aa17.03■□□□□ 0.32
SSNA1-202ENST00000459860 RAMP3O60896 148 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 PGLYRP1O75594 196 aaPredicted RBP17.02■□□□□ 0.32
SSNA1-202ENST00000459860 OR2A4O95047 310 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 HPRT1P00492 218 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 PSMB8P28062 276 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 SCGB2B2Q4G0G5 96 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 PHLDA2Q53GA4 152 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 RNF152Q8N8N0 203 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 MINDY2Q8NBR6 621 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 LFNGQ8NES3 379 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 OR5M8Q8NGP6 311 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 RHOVQ96L33 236 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 OR2A7Q96R45 310 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 RSRP1Q9BUV0 290 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 NUBP2Q9Y5Y2 271 aa17.02■□□□□ 0.32
SSNA1-202ENST00000459860 DISC1C4P0D8 188 aa17.01■□□□□ 0.31
SSNA1-202ENST00000459860 ARPC1BO15143 372 aaKnown RBP17.01■□□□□ 0.31
SSNA1-202ENST00000459860 KBTBD11O94819 623 aa17.01■□□□□ 0.31
SSNA1-202ENST00000459860 AKAIN1P0CW23 69 aa17.01■□□□□ 0.31
SSNA1-202ENST00000459860 BRWD1-AS2P59051 145 aa17.01■□□□□ 0.31
SSNA1-202ENST00000459860 TAS2R31P59538 309 aa17.01■□□□□ 0.31
SSNA1-202ENST00000459860 ZNF695Q8IW36 515 aa17.01■□□□□ 0.31
SSNA1-202ENST00000459860 VKORC1L1Q8N0U8 176 aa17.01■□□□□ 0.31
SSNA1-202ENST00000459860 ZNF430Q9H8G1 570 aaPredicted RBP17.01■□□□□ 0.31
SSNA1-202ENST00000459860 WNK1Q9H4A3 2382 aa17.01■□□□□ 0.31
SSNA1-202ENST00000459860 DPPA5A6NC42 116 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 IGLV1-40P01703 118 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 EGR2P11161 476 aaPredicted RBP17■□□□□ 0.31
SSNA1-202ENST00000459860 NQO2P16083 231 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 F2RP25116 425 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 PPP5CP53041 499 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 PYDC2Q56P42 97 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 C19orf54Q5BKX5 351 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 SPANXN2Q5MJ10 180 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 LCNL1Q6ZST4 164 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 SSX9Q7RTT3 188 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 LHFPL1Q86WI0 220 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 ZNF486Q96H40 463 aaPredicted RBP17■□□□□ 0.31
SSNA1-202ENST00000459860 TMEM68Q96MH6 324 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 SOSTQ9BQB4 213 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 PLEKHA2Q9HB19 425 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms