RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 A0A1B0GTI1 187 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 ADRA2AP08913 450 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 SSPNQ14714 243 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 ATRAIDQ6UW56 229 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 ZNF645Q8N7E2 425 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 DEFB108BQ8NET1 73 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 LRRC29Q8WV35 223 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 C1RLQ9NZP8 487 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 ASAH2BP0C7U1 165 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 ZFP36L2P47974 494 aaKnown RBP8.39□□□□□ -1.07
UFD1-205ENST00000459854 FGF12P61328 243 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 RPS4XP62701 263 aaKnown RBP8.39□□□□□ -1.07
UFD1-205ENST00000459854 OR10AC1Q8NH08 325 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 GPX4P36969 197 aaPredicted RBP8.39□□□□□ -1.07
UFD1-205ENST00000459854 TMPRSS3P57727 454 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 C1QL3Q5VWW1 255 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 CLDND2Q8NHS1 167 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 SOSTQ9BQB4 213 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 WDR54Q9H977 334 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 NDUFA2O43678 99 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BKO60814 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BJP06899 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BOP23527 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BBP33778 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BDP58876 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BCP62807 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST2H2BEQ16778 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.39□□□□□ -1.07
UFD1-205ENST00000459854 LDLRAD2Q5SZI1 272 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 ZNF841Q6ZN19 808 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 LINC00696Q6ZRV3 163 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 OR9G4Q8NGQ1 327 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 PLPPR1Q8TBJ4 325 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 SLC25A40Q8TBP6 338 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 CT55Q8WUE5 264 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BHQ93079 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BNQ99877 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BMQ99879 126 aa8.39□□□□□ -1.07
UFD1-205ENST00000459854 PIKFYVEQ9Y2I7 2098 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 COLCA2A8K830 154 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 M0R1B8 84 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 HSD52Q0P140 79 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 COL9A2Q14055 689 aaPredicted RBP8.38□□□□□ -1.07
UFD1-205ENST00000459854 SYT8Q8NBV8 401 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 OR2K2Q8NGT1 345 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 ABHD3Q8WU67 409 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 GATAD1Q8WUU5 269 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 IGHV3-15A0A0B4J1V0 119 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 RNF222A6NCQ9 220 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 ZNF324O75467 553 aaPredicted RBP8.38□□□□□ -1.07
UFD1-205ENST00000459854 UPK3AO75631 287 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 DXOO77932 396 aaKnown RBP8.38□□□□□ -1.07
UFD1-205ENST00000459854 GHRHP01286 108 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 PLA2G5P39877 138 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 RAB9AP51151 201 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 WNT2BQ93097 391 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 GPR146Q96CH1 333 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 HIST1H2BLQ99880 126 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 MEGF9Q9H1U4 602 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 GPR35Q9HC97 309 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 KLHDC2Q9Y2U9 406 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 GRIFINA4D1Z8 144 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 IZUMO1RA6ND01 250 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 PGLYRP1O75594 196 aaPredicted RBP8.38□□□□□ -1.07
UFD1-205ENST00000459854 MPZL1O95297 269 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 UBE2V1Q13404 147 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 SPINK9Q5DT21 86 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 PRNTQ86SH4 94 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 GCSAMQ8N6F7 178 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 PRSS27Q9BQR3 290 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 AURKAIP1Q9NWT8 199 aaPredicted RBP8.38□□□□□ -1.07
UFD1-205ENST00000459854 TRAV38-1A0A0B4J264 116 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 IGKV1-8A0A0C4DH67 115 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 C10orf111Q8N326 155 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 LRTM2Q8N967 370 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 TM4SF19Q96DZ7 209 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 HDHD3Q9BSH5 251 aaPredicted RBP8.38□□□□□ -1.07
UFD1-205ENST00000459854 NRN1Q9NPD7 142 aa8.38□□□□□ -1.07
UFD1-205ENST00000459854 CNOT1A5YKK6 2376 aaKnown RBP8.37□□□□□ -1.07
UFD1-205ENST00000459854 LOC389332A0A1B0GUA5 103 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 LINC01549A6NIU2 74 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 PDCD1Q15116 288 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 TNXAQ16473 311 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 TMEM177Q53S58 311 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 ZFAND6Q6FIF0 208 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 OR2Z1Q8NG97 314 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 OR2H1Q9GZK4 316 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 IL36RNQ9UBH0 155 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 MKI67P46013 3256 aaKnown RBP8.37□□□□□ -1.07
UFD1-205ENST00000459854 DEFB108AA8MXU0 73 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 ITGB1BP1O14713 200 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 DNAL4O96015 105 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 CD5P06127 495 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 KLRB1Q12918 225 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 DCAF10Q5QP82 559 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 WDR31Q8NA23 367 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 CHCHD1Q96BP2 118 aaKnown RBP8.37□□□□□ -1.07
UFD1-205ENST00000459854 TMEM14DPA8MWL7 114 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 PRRG2O14669 202 aa8.37□□□□□ -1.07
UFD1-205ENST00000459854 PLXNA2O75051 1894 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms