RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ZNF702PQ9H963 129 aa12.39□□□□□ -0.43
VCX3B-204ENST00000453306 PRR13Q9NZ81 148 aa12.39□□□□□ -0.43
VCX3B-204ENST00000453306 NOTCH1P46531 2555 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 CRYM-AS1A6NIL9 109 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 NCBP2LA6PVI3 153 aaKnown RBP12.38□□□□□ -0.43
VCX3B-204ENST00000453306 RRHO14718 337 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 RBFOX2O43251 390 aaKnown RBP eCLIP12.38□□□□□ -0.43
VCX3B-204ENST00000453306 TSPAN9O75954 239 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 RRASP10301 218 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 ECI1P42126 302 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 TAGLNQ01995 201 aaKnown RBP12.38□□□□□ -0.43
VCX3B-204ENST00000453306 DHODHQ02127 395 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 PJVKQ0ZLH3 352 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 MMDQ15546 238 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 RTL8BQ17RB0 113 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 ABCA11PQ4W5N1 156 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 LIAT1Q6ZQX7 453 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 OR4C13Q8NGP0 309 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 LHFPL5Q8TAF8 219 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 GLYATL2Q8WU03 294 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 BORCS5Q969J3 196 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 RNF5Q99942 180 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 PITPNC1Q9UKF7 332 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 MOB4Q9Y3A3 225 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 PRELID3BQ9Y3B1 194 aa12.38□□□□□ -0.43
VCX3B-204ENST00000453306 C3orf85A0A1B0GTC6 90 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 NBR2O15453 112 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 SLC25A17O43808 307 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 TCRBP04435 133 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 IL6RP08887 468 aaPredicted RBP12.37□□□□□ -0.43
VCX3B-204ENST00000453306 RPA2P15927 270 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 ANXA7P20073 488 aaKnown RBP12.37□□□□□ -0.43
VCX3B-204ENST00000453306 RBMS2Q15434 407 aaKnown RBP12.37□□□□□ -0.43
VCX3B-204ENST00000453306 C5orf64Q2M2E5 130 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 C16orf82Q7Z2V1 217 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 NRARPQ7Z6K4 114 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 SLC25A42Q86VD7 318 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 Q8N2B8 174 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 HSPB9Q9BQS6 159 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 NAA60Q9H7X0 242 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 COPZ2Q9P299 210 aa12.37□□□□□ -0.43
VCX3B-204ENST00000453306 C14orf166Q9Y224 244 aaKnown RBP12.37□□□□□ -0.43
VCX3B-204ENST00000453306 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 CENPXA8MT69 81 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 ARPC1BO15143 372 aaKnown RBP12.36□□□□□ -0.43
VCX3B-204ENST00000453306 SHOXO15266 292 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 FGF16O43320 207 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 OR5AC1P0C628 307 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 SAA1P0DJI8 122 aaPredicted RBP12.36□□□□□ -0.43
VCX3B-204ENST00000453306 AKR1C4P17516 323 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 LGALS7P47929 136 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 CATR1Q13166 79 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 TMEM95Q3KNT9 176 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 POC5Q8NA72 575 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 OR8H1Q8NGG4 311 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 OR4S2Q8NH73 311 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 OSR1Q8TAX0 266 aaPredicted RBP12.36□□□□□ -0.43
VCX3B-204ENST00000453306 FAM110DQ8TAY7 271 aaPredicted RBP12.36□□□□□ -0.43
VCX3B-204ENST00000453306 HARBI1Q96MB7 349 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 PLEKHA2Q9HB19 425 aa12.36□□□□□ -0.43
VCX3B-204ENST00000453306 H0Y980 276 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 TSPAN15O95858 294 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 HPRT1P00492 218 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 EGR2P11161 476 aaPredicted RBP12.35□□□□□ -0.43
VCX3B-204ENST00000453306 MYOD1P15172 320 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 UCP1P25874 307 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 KIR2DS2P43631 304 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 UBE2KP61086 200 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 NDPQ00604 133 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 TMEM187Q14656 261 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 POU2AF1Q16633 256 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 SSX9Q7RTT3 188 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 PUSL1Q8N0Z8 303 aaKnown RBP12.35□□□□□ -0.43
VCX3B-204ENST00000453306 DUSP18Q8NEJ0 188 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 SCGB3A2Q96PL1 93 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 CLCC1Q96S66 551 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 TSNAXQ99598 290 aaKnown RBP12.35□□□□□ -0.43
VCX3B-204ENST00000453306 SERTAD4Q9NUC0 356 aa12.35□□□□□ -0.43
VCX3B-204ENST00000453306 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
VCX3B-204ENST00000453306 CMYA5Q8N3K9 4069 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 TRAV6A0A075B6T7 132 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 IGHV7-81A0A0B4J1V7 117 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 A0A0G2JRQ6 117 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 TEX13DA0A0J9YY54 714 aaPredicted RBP12.34□□□□□ -0.43
VCX3B-204ENST00000453306 IGKV1-5P01602 117 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 P0C879 139 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 G6PCP35575 357 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 IZUMO4Q1ZYL8 232 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 ANKRD55Q3KP44 614 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 CCDC71LQ8N9Z2 235 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 R3HDM4Q96D70 268 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 GALNT14Q96FL9 552 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 RHOVQ96L33 236 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 NPFFR1Q9GZQ6 430 aa12.34□□□□□ -0.43
VCX3B-204ENST00000453306 TMEM222Q9H0R3 208 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms