RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 EGR2P11161 476 aaPredicted RBP11.26□□□□□ -0.61
COL3A1-203ENST00000450867 MEF2DQ14814 521 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 VMA21Q3ZAQ7 101 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 STEAP1BQ6NZ63 245 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 TEX38Q6PEX7 206 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 CMTM1Q8IZ96 169 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 MYOZ3Q8TDC0 251 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 CD300LFQ8TDQ1 290 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 GPHA2Q96T91 129 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 PARP11Q9NR21 331 aa11.26□□□□□ -0.61
COL3A1-203ENST00000450867 FAM212BQ9NTI7 297 aaPredicted RBP11.26□□□□□ -0.61
COL3A1-203ENST00000450867 TRAV41A0A0B4J266 112 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 ANKRD20A5PA0PJZ0 165 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 ARPC1BO15143 372 aaKnown RBP11.25□□□□□ -0.61
COL3A1-203ENST00000450867 TNFSF12O43508 249 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 PGLYRP1O75594 196 aaPredicted RBP11.25□□□□□ -0.61
COL3A1-203ENST00000450867 RAB3DO95716 219 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 TSPAN15O95858 294 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 IFNA6P05013 189 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 SAA1P0DJI8 122 aaPredicted RBP11.25□□□□□ -0.61
COL3A1-203ENST00000450867 VDAC1P21796 283 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 PSMB8P28062 276 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 PJVKQ0ZLH3 352 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 ZNF79Q15937 498 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 PRSS8Q16651 343 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 AKIRIN2Q53H80 203 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 TREML4Q6UXN2 200 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 SLC38A6Q8IZM9 456 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 SPAG16Q8N0X2 631 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 PUSL1Q8N0Z8 303 aaKnown RBP11.25□□□□□ -0.61
COL3A1-203ENST00000450867 CADM3Q8N126 398 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 OR4D10Q8NGI6 311 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 OR6Q1Q8NGQ2 317 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 ZNF486Q96H40 463 aaPredicted RBP11.25□□□□□ -0.61
COL3A1-203ENST00000450867 ZFP57Q9NU63 452 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 NOTCH3Q9UM47 2321 aa11.25□□□□□ -0.61
COL3A1-203ENST00000450867 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 RAMP3O60896 148 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 HRASP01112 189 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 FGF2P09038 288 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 AKAIN1P0CW23 69 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 F2RP25116 425 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 SLC6A1P30531 599 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 TAS2R31P59538 309 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 RND3P61587 244 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 OR2B11Q5JQS5 317 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 TERB2Q8NHR7 220 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 VSTM2AQ8TAG5 236 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 ARPC1AQ92747 370 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 TRIM63Q969Q1 353 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 RHOVQ96L33 236 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 AIFM2Q9BRQ8 373 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 PLEKHA2Q9HB19 425 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 SLC2A8Q9NY64 477 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 COMMD9Q9P000 198 aa11.24□□□□□ -0.61
COL3A1-203ENST00000450867 A6NHS1 94 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 G3V318 75 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 CREBL2O60519 120 aaPredicted RBP11.23□□□□□ -0.61
COL3A1-203ENST00000450867 KBTBD11O94819 623 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 HPRT1P00492 218 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 RLN1P04808 185 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 IL6RP08887 468 aaPredicted RBP11.23□□□□□ -0.61
COL3A1-203ENST00000450867 RPL23AP62750 156 aaKnown RBP11.23□□□□□ -0.61
COL3A1-203ENST00000450867 TMEM267Q0VDI3 215 aaPredicted RBP11.23□□□□□ -0.61
COL3A1-203ENST00000450867 FXYD3Q14802 87 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 MMD2Q8IY49 270 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 OR4C16Q8NGL9 310 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 OR51H1Q8NH63 302 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 DEDD2Q8WXF8 326 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 MRGPRFQ96AM1 343 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 CLCC1Q96S66 551 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 BET1LQ9NYM9 111 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 WSB1Q9Y6I7 421 aa11.23□□□□□ -0.61
COL3A1-203ENST00000450867 SOX15O60248 233 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 OR2A4O95047 310 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 BRI3O95415 125 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 NQO2P16083 231 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 S100GP29377 79 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 ECI1P42126 302 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 CDX1P47902 265 aaPredicted RBP11.22□□□□□ -0.61
COL3A1-203ENST00000450867 SURF2Q15527 256 aaPredicted RBP11.22□□□□□ -0.61
COL3A1-203ENST00000450867 NSUN5P1Q3KNT7 163 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 ZNF585BQ52M93 769 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 CXorf66Q5JRM2 361 aaPredicted RBP11.22□□□□□ -0.61
COL3A1-203ENST00000450867 SPANXN2Q5MJ10 180 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 IDO2Q6ZQW0 420 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 Q8N402 240 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 POC5Q8NA72 575 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 OR4F17Q8NGA8 305 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 TMEM68Q96MH6 324 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 OR2A7Q96R45 310 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 OR4F4Q96R69 305 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 THAP7Q9BT49 309 aaPredicted RBP11.22□□□□□ -0.61
COL3A1-203ENST00000450867 ZNF430Q9H8G1 570 aaPredicted RBP11.22□□□□□ -0.61
COL3A1-203ENST00000450867 SLC2A9Q9NRM0 540 aa11.22□□□□□ -0.61
COL3A1-203ENST00000450867 FOXA2Q9Y261 457 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms